Thiomicrolovo sulfuroxydans: LOH54_02320
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Entry
LOH54_02320 CDS
T11233
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tsul Thiomicrolovo sulfuroxydans
Pathway
tsul03030
DNA replication
tsul03430
Mismatch repair
tsul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LOH54_02320
03430 Mismatch repair
LOH54_02320
03440 Homologous recombination
LOH54_02320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsul03032
]
LOH54_02320
03400 DNA repair and recombination proteins [BR:
tsul03400
]
LOH54_02320
Enzymes [BR:
tsul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LOH54_02320
DNA replication proteins [BR:
tsul03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LOH54_02320
DNA repair and recombination proteins [BR:
tsul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LOH54_02320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DUF7708
Motif
Other DBs
NCBI-ProteinID:
UFS62969
LinkDB
All DBs
Position
complement(464145..464936)
Genome browser
AA seq
263 aa
AA seq
DB search
MIEASQLPQKLCEGLTAYQIEQLTGESAELAVELMRAQGLELVSRDGTRYYPQSCDQLLS
AATFCIVDIETNGSKPDKHQIIEIGAVKVQNLHIIDRFESLVRCDHISGHITEITGIAEE
DTQDAPGLREVLSDFKLFLGNDIFVGHDVKFDFQFTSKMMERVGMAPLLNRSLCTIDLAE
RTISSYRYGLAFLNEQLELYKEATHHRALSDAMTTAKLFKRTLKCIPTEIQTVEELITFS
KKAKRLKRPKFPPQPPEQTAPEA
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagcctcccaactcccccagaagctctgcgaagggctgacagcctaccagatc
gagcagctgaccggcgagagcgccgaactggccgtcgaactgatgcgcgcacaggggctc
gaactcgtcagccgcgacggcacgcgctactacccccaaagctgcgaccagctcctctcg
gcggcgaccttctgcatcgtcgacattgagaccaacggctccaagccggacaaacaccag
atcatcgagatcggcgccgtcaaggtgcagaacctccacatcatcgaccgttttgagagc
ctggtgcggtgcgaccatatctcggggcacatcaccgagatcaccggcatcgcggaggag
gacacccaggatgcacctggcctgcgggaagtgctgtcggacttcaaactgttcctgggc
aacgacatcttcgtcggccacgacgtcaaattcgactttcagttcacttcgaaaatgatg
gagcgcgtcgggatggcgcccctgctcaatcgcagcctctgcaccatcgacctcgccgag
cgcaccatcagctcctatcgctacggcctggcgttcctgaacgaacagctcgaactctac
aaagaggcgacccaccaccgcgccctctccgacgcgatgacgacggcaaagctcttcaaa
cgcaccctaaaatgcatcccaaccgagatccaaaccgttgaggagctcatcaccttctcc
aagaaggccaaacgcctcaaacgcccgaaattcccgccccagcccccggaacagacagcc
cccgaagcctaa
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