Thiomicrolovo sulfuroxydans: LOH54_02365
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Entry
LOH54_02365 CDS
T11233
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
tsul Thiomicrolovo sulfuroxydans
Pathway
tsul00190
Oxidative phosphorylation
tsul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tsul00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
LOH54_02365
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LOH54_02365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsul03019
]
LOH54_02365
Enzymes [BR:
tsul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
LOH54_02365
Messenger RNA biogenesis [BR:
tsul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LOH54_02365
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
UFS62978
LinkDB
All DBs
Position
complement(470850..472943)
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AA seq
697 aa
AA seq
DB search
MTNLKDPKFYFNRELSWLQFNTRVLQQAQDKKQPLLERLKFLAIYGTNLDEFYMIRVAGL
KKLFTSGIILSGPDRLTPLQQLREIRKYLHQELQVVEHTFIEIMAGLKDEGIFLKRYQEL
NNQEKGEVNRYFHEHIYPVIVPIAVDGTHPFPHLNNLSFGLIVKLQDNDDPSVQRYGLVR
IPRVLPRFVQIGTGIYVPIGSIVAQHIDELFPGYTLLQYTPFRVTRNADITIEEEEADDF
MEMLEEGLKLRKKGELVRLEIGVDADDELIDFFNRHTNVYKDDLYRFKIVLNLASLWQIV
GNMDFAHLVAAPYKPRNLPPLDSEDSIYSVLDKQDVLLYHPYESFEPIVKFIQAAAKDPD
VVSIRMTLYRSGTNSPIVNALMQAAESGKQVTTMVELKARFDEENNLIWAKALESAGAHV
IYGIPGFKVHAKAALVTRKVGDKLKQYAHLGTGNYNPGTAKIYTDVSYMTSNEAITNDMT
RFFHFLTGFSKKGKLNKLYMSPTQTKPKILSLIQNETRMGTEGRIIVKVNSLVDEDVIRA
LYKASQAGVKVDLIVRGICCLVPGIEGVSENIRVTSLIGKYLEHARVFYFKHGHPQMYIS
SADWMPRNLVRRIELMTGIEDEESKEKLLQLLTLQLTDNVLAHELQSDGSYRRVEAGETP
VNSQLLLEQHTTKMYKSSKKRDTTYINKLASRLFKES
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatctcaaagacccaaaattctatttcaaccgtgaactctcctggctgcagttc
aatacgcgcgtgctgcagcaggcgcaggacaagaagcagcccctgcttgaacgcctgaag
ttccttgccatctacggcaccaacctcgacgagttctatatgatccgtgtcgcgggtctc
aagaaactctttacctccgggatcatcctctccggccccgaccgcctcaccccgctgcag
cagctgcgcgagatccgcaaatacctccaccaggagctgcaggtcgtcgagcacaccttc
atcgagatcatggccggccttaaagacgaggggatctttctcaaacgctaccaggagctg
aacaaccaggagaagggggaggtgaaccgctacttccacgagcacatctaccctgttatc
gtcccgatcgccgtcgacggtacccaccccttcccgcacctgaacaacctcagtttcggc
ctgatcgtcaaactccaggacaatgacgatcccagcgtccagcgctacggcctcgtgcgc
atcccccgggtcctgccccgtttcgtgcagatcggcaccgggatctacgtccccatcggc
agcatcgtcgcccagcacatcgatgagctcttcccgggctacaccctgctgcagtacacc
cccttccgcgtcacgcgcaatgccgacattaccatcgaggaggaggaagcggacgacttt
atggagatgctcgaagaggggctgaaactccgcaaaaaaggagagctggtccgtctcgag
atcggggtcgacgccgacgacgaactgatcgacttcttcaaccgccacaccaatgtctac
aaagacgacctctaccgcttcaagatcgtgctcaacctcgccagcctctggcagatcgtc
ggcaacatggattttgcgcacctcgtcgcggcaccgtacaaaccgcggaacctgccgccg
ctggattccgaggacagcatctactccgtcctcgacaaacaggacgtcctgctctaccac
ccctacgagagtttcgagcccatcgtcaagttcatccaggcggcggccaaggaccccgat
gtcgtctccatccggatgacgctctaccgcagcgggacgaactcgcccatcgtcaacgcc
ctgatgcaggcggccgaatcgggcaagcaggtgacgaccatggtcgaactcaaagcgcgt
ttcgacgaagagaacaacctcatctgggccaaggcgctggagagcgcgggggcgcacgtc
atctacggcatccccggcttcaaggtccacgccaaggccgcccttgtcacccgcaaggtc
ggcgacaagctcaaacagtacgcgcacctgggcacggggaactacaaccccggtacggcg
aagatctataccgatgtcagttacatgacctccaacgaggcgatcacgaacgacatgacc
cgcttcttccactttttgacgggcttcagcaaaaaagggaaactcaacaagctctacatg
tccccgacccagaccaaaccgaagatcctctcgctgatccagaacgagacccggatggga
acggaggggcgcatcatcgtcaaggtcaactccctcgtcgacgaggatgtcatccgcgcg
ctttataaagcgtcgcaagccggggtcaaggtcgacctgatcgtccgcggcatctgctgc
ctcgtcccgggcattgaaggggtgagcgagaacatccgggtcacctcgctgatcggaaaa
tacctcgaacatgcccgtgtcttctacttcaaacatggccatccgcagatgtacatctcc
agcgccgactggatgccgcggaacctcgtgcgccgtatcgaactgatgacgggcattgag
gatgaagagtccaaagagaagctcctgcagctgctcaccctccagctcacggacaacgtc
cttgcccacgaactccagagcgacggaagctaccgccgggtcgaggccggcgaaacgccg
gtcaactcccagctcctgctcgagcagcatacgaccaagatgtacaaatcgtcgaagaag
cgcgatacgacctatatcaacaaactggcttcccgtctcttcaaagagagctga
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