Thiomicrolovo sulfuroxydans: LOH54_02495
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Entry
LOH54_02495 CDS
T11233
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tsul Thiomicrolovo sulfuroxydans
Pathway
tsul03420
Nucleotide excision repair
tsul03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tsul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LOH54_02495
03430 Mismatch repair
LOH54_02495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsul03400
]
LOH54_02495
Enzymes [BR:
tsul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LOH54_02495
DNA repair and recombination proteins [BR:
tsul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LOH54_02495
MMR (mismatch excision repair)
Other MMR factors
LOH54_02495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UFS63003
LinkDB
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Position
495019..497067
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AA seq
682 aa
AA seq
DB search
MEQIFKNLNEQQAEAVKKIDGPLLILAGAGSGKTTTITSRLAYLLDVVGIPASNTLTLTF
TNKAAKEMRERALAMIDAKSYPPLLCTFHKFGLLFLKFHIHRLGRENNFVVIDTDDKKRI
LKKLAGDLPMPLVASEISRYKNSLITPEEAHAQAEQKNYEQIAKVYKEYEAYLVENNLVD
FDDLIALTYKLLDEHLELAEETSKRYQYIMIDEYQDTNELQFKLLQKLCSAHNNLCVVGD
DDQSIYGWRGAHVRNILEFDQDFQDAMVVKLEHNYRSRTPILTVANALIEHNRSRLGKTL
LPTRGEGDDVKMLSSNDENEEASKISLQINKLIGEGIRPNEIAVLYRINALSRSLEEGLN
RAGIPYKLVGGLRFYDRAEIKDLISYLRVITNHHDNFSMKRIINKPKRGIGKASIDKLEL
AAMEQERSLYDLIRLSSTAELEALVRKKNTTTLKQFISELEQMRAIADESLYSFAERLDE
IFKIKAFYEAMPDGTERVQNIDEFFGLFRDFIKQNPEASLDAFLNEVSLQSEQDQVEGES
IYIMSIHASKGLEFEHLFIIGLEEGFLPLVGDGSDLEEERRLGYVSFTRAKDTLTLSHVQ
SRYYKGRRTELEKSRFFGEAGLCESSLKIEKNTAFKKGDLVRHKIFGAGRVIGVSKAGRE
FKLNINFGGNKREILASFVERL
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaattttcaaaaacctcaacgagcagcaggccgaagccgtcaagaagatcgat
ggtcccttattgatccttgcgggcgcgggcagcggcaaaacgacgaccattacctcgcgg
cttgcctacctgctggacgttgtcgggatcccggcgagcaacacgctgacgctgaccttt
accaacaaagcggccaaggagatgcgcgaacgtgccctggcgatgatcgacgcgaaaagc
tacccgccgctgctgtgcaccttccacaagttcggcctgctctttttgaagttccatatc
caccggctggggcgggagaacaacttcgttgtcatcgatacggatgacaagaagcggatt
ctgaaaaagcttgccggcgacctcccgatgcccctcgtggccagcgagatctcccgctat
aagaactccctgattacgccggaagaggcgcatgcccaggcggagcagaagaactacgaa
cagatcgcaaaggtgtacaaggagtacgaggcgtacctggtggagaacaacctggtggac
tttgacgacctgattgccctgacgtacaaactgctcgatgaacacctggagctggccgaa
gagacgagcaagcgctaccagtacattatgatcgatgagtaccaggatacgaacgaactg
cagttcaagctgctccagaagctttgcagtgcgcacaacaacctctgcgtggtcggggat
gacgaccagagcatctacggctggcgcggggcgcacgtgcgcaacatcctggagtttgac
caggacttccaggacgccatggtcgtcaaactcgagcacaactaccgttcgcgtacgccg
attctgaccgttgccaacgcgctgatcgagcataaccgctcccgcctgggcaagacgctg
ctgccgacccggggcgaaggggatgacgtcaagatgctctcttcgaatgacgaaaacgag
gaggcgagcaagatctctctgcagatcaataaactgatcggcgaagggatacgccccaac
gagatcgccgtgctctaccgcatcaatgcgctcagccgctccctcgaggaggggctcaac
cgcgccgggatcccctacaagctcgtcggcgggctgcgcttttacgaccgtgccgagatc
aaggacctgatcagctacctgcgcgtcatcaccaaccaccacgacaacttctcgatgaaa
cgcatcatcaacaagcccaagcggggcataggcaaggcgtccatcgacaagctggagctg
gctgccatggagcaggagcgttccctatacgatcttatccgcctcagcagcacggccgag
ctcgaggccctggtgcgcaagaaaaacacgacgaccctcaaacagttcatcagcgagctg
gagcagatgcgcgcgatcgcggacgagtcgctctacagtttcgccgagcgtcttgacgag
atctttaagatcaaggccttctacgaagcgatgcccgacggcaccgagagggtgcagaac
atcgacgagttcttcgggcttttccgcgactttatcaagcagaacccggaggcgagcctg
gacgcgttcctgaacgaggtctccctgcagagcgaacaggaccaggtcgaaggggagagc
atctacattatgagtatccacgcctccaaggggctggagttcgaacacctcttcatcatc
gggctcgaagaggggttcctcccccttgtcggggacggcagcgacctggaggaggagcgc
cgcctgggctacgtctcctttacgcgcgccaaagatacgctgacgctgtcgcacgtgcag
agccgctactacaaggggcgccgtaccgaactggagaagagccgcttcttcggcgaagcg
ggactgtgcgaaagctcgctgaagatcgagaagaacacggcgttcaaaaaaggggacctc
gtccgccacaagatcttcggcgccgggcgggtcataggcgtgagcaaggccgggcgcgaa
ttcaagctcaacatcaacttcggcggcaacaagcgggagatcctcgcctcttttgtcgaa
cgcctctga
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