Thiomicrolovo sulfuroxydans: LOH54_02555
Help
Entry
LOH54_02555 CDS
T11233
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
tsul Thiomicrolovo sulfuroxydans
Pathway
tsul02024
Quorum sensing
tsul03060
Protein export
tsul03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
tsul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LOH54_02555 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LOH54_02555 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LOH54_02555 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
tsul02044
]
LOH54_02555 (ffh)
Enzymes [BR:
tsul01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
LOH54_02555 (ffh)
Secretion system [BR:
tsul02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LOH54_02555 (ffh)
Eukaryotic Sec-SRP protein
LOH54_02555 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
AAA_31
Zeta_toxin
AAA_16
SLFN-g3_helicase
cobW
GTP_EFTU
NAT10_TcmA_helicase
AAA_19
KAP_NTPase
AAA_30
APS_kinase
ResIII
AAA_33
AAA_17
KTI12
ATPase
T2SSE
ATPase_2
NACHT
nSTAND_NTPase5
nSTAND3
Fe-ADH
AAA_14
Thymidylate_kin
AAA_18
NPHP3_N
6PF2K
AAA_28
AAA_24
AAA
nSTAND6
ABC_tran
SWI2_SNF2
Fe-ADH_2
RMI1_C
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
UFS63015
LinkDB
All DBs
Position
complement(503895..505241)
Genome browser
AA seq
448 aa
AA seq
DB search
MFDTLTDSFTSAIKKIRFHDDEKALKKALVELKKALLKADVHHKVVKELIDRVELDTKKA
GIGKDQFLDAMRFTLHDLLKTEGHQGFVFAANPPTVILMTGLQGSGKTTTTGKLATYLKE
QKKKKVLIVAADLQRMAAVEQLRQITEQIGVDLYEDEATKNPVEVVTAAMAKAKSNLYDV
VLVDTAGRLAIDEELMTELKQVRDAAKPSEIFYVADSMTGQDAVRTAQSFKEQIGIDGVI
LSKYDGDAKGGVALGIASQVQVPLRFIGAGEKMADLEIFLPDRIVNRLMGLGDIEGLAEK
ASSVIDEKQAKKLTQKIKKGQFNFNDFLEQMESMKKLGSMKSLLGMIPGMGDMSKALKDF
DLENSQELKQIKALVSSMTPKERENPDLLNNSRKQRLAKGAGMDQMDVNRILKQFKNAAK
MAKKFSGKKGMQDLQNMMSQMQGGKFPR
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgataccctgacggattcgtttacgtccgccattaaaaagatccgcttccacgac
gatgaaaaggcgctgaagaaagcgcttgtcgaactgaaaaaagcgctgctcaaagccgat
gtccatcacaaggttgtcaaagagcttatcgaccgcgtcgaactggatacgaagaaagcc
ggtatcggcaaggaccagttccttgacgcgatgcgcttcaccctgcacgacctgctgaaa
accgaagggcaccaggggttcgtttttgcggcaaatccccccaccgtcatcctgatgacc
ggccttcagggttcgggaaaaacgacgacgacggggaaactcgccacctacctcaaagag
cagaaaaagaagaaggtcctcatcgtcgcggcggacctgcagcgtatggccgccgtcgaa
cagctccgccagatcacggagcagatcggcgtcgacctgtatgaagacgaggcgaccaag
aacccggtggaggtcgtcacggcggccatggccaaagcaaaaagcaacctctacgacgtc
gtgctcgtcgatacggccggacgcctggccatcgacgaggagctgatgacggagctcaag
caggtccgcgacgccgccaagccgagcgagatcttctacgtcgccgactccatgacaggg
caggatgccgtccgcaccgcccagagcttcaaagagcagatcgggatcgacggagtgatc
ctgagcaaatacgacggtgacgccaaaggcggcgtcgcgctgggcatcgcctctcaggtt
caggtgccgctgcgctttatcggtgccggtgaaaaaatggcggacctcgaaatcttcctc
cccgaccgcatcgtcaaccgcctgatgggactgggggacatcgaggggctggcagagaag
gcctcaagcgtcatcgatgagaagcaggcgaaaaaactgacccagaagatcaagaagggg
cagttcaacttcaacgacttcctcgagcagatggagagcatgaagaagctcggctccatg
aaatccctgctggggatgatcccgggcatgggggacatgtccaaggcgctcaaggacttc
gacctggagaactcccaggaactcaaacagatcaaggcgctggtcagctccatgaccccc
aaagagcgcgagaaccccgacctgctcaacaacagccgcaagcagcgtctggccaaaggg
gccgggatggaccagatggacgtcaaccgtatcctcaagcagttcaaaaacgccgcaaag
atggccaagaaattctccggcaaaaaagggatgcaggatctgcagaacatgatgagccag
atgcagggcggcaagttcccgcgctga
DBGET
integrated database retrieval system
