Thiomicrolovo sulfuroxydans: LOH54_02855
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Entry
LOH54_02855 CDS
T11233
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
tsul Thiomicrolovo sulfuroxydans
Pathway
tsul03030
DNA replication
tsul03430
Mismatch repair
tsul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LOH54_02855
03430 Mismatch repair
LOH54_02855
03440 Homologous recombination
LOH54_02855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsul03032
]
LOH54_02855
03400 DNA repair and recombination proteins [BR:
tsul03400
]
LOH54_02855
Enzymes [BR:
tsul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LOH54_02855
DNA replication proteins [BR:
tsul03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LOH54_02855
DNA repair and recombination proteins [BR:
tsul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LOH54_02855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_30
AAA_14
AAA_5
ResIII
AAA_16
AAA_24
TIP49
AAA_19
DNA_pol3_gamma3
Ribosomal_60s
AAA_assoc_2
AAA_7
DEAD
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UFS63074
LinkDB
All DBs
Position
complement(571061..572899)
Genome browser
AA seq
612 aa
AA seq
DB search
MNERSQVLALKYRPRRFEDLIGQETIAQTLSLALDSKRLSHAYLFSGLRGSGKTSTARIF
AKALMCENGPTSHPCEQCEHCVTANEGRHMDIIEMDAASSRKIDDIRDLIEHTKYQPASA
KFKIFIIDEVHMLTKEAFNALLKTLEEPPPFVKFILATTDPLKLPATILSRTQHFRFKKI
SNQDVSAHLRHILNLENITYEPEALQILARSGSGSLRDTLTLLDQAIIYSKHHVDVSTVT
EMLGLIDPQFFESLFGVIFSKDRALLVNTLRELEAYEAEMVVDELTSWLKERLYDHDDSR
FSPLLLERFFRILSEAKSLFAINAEGSFVLGLIFFKMIEALKVKEIDQMIESLEAQVARP
DSVAYASAPAATAAPAVPTATAAPAAVNEEAPETPAAAEPEPVVAPAPDPALAKFEALCA
RIEDRSADLGKCFREQITFIAYGDDTLTWESCADDDCRAKLKHGFPVIKQLVREVFGFET
KIKHNPCSQPAEEAVPKPEPVSGPVNVAGTVPTPESAPMPESAYGSGESVSPVEEMEERP
AYMESYSAAEEAPQSASMTEEVETGSGSCVTGNCEPDLSTREIDGNAILDEPMIQKATEL
FEATKITIQNKV
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgagcgctcgcaagtcctggccctgaagtaccgtccccgccgttttgaagacctg
atcgggcaggagacgatcgcgcagacgctctccctggcgctggattccaaacgcctctcg
cacgcctacctcttctccggcctgcgcggttcgggcaagacctcgacggcgcggatcttc
gccaaggcgctgatgtgtgaaaacggaccgacttcgcacccctgcgaacagtgcgaacac
tgtgtcaccgccaacgaggggcgccacatggacatcatcgagatggacgccgcttccagc
cgaaagatcgacgatatccgcgacctcatcgaacacaccaagtaccagcccgccagcgcg
aagttcaaaatcttcattatcgacgaagtgcatatgctcaccaaagaggcgttcaacgcc
ctgctcaaaaccctggaggagcccccgcccttcgtcaagttcatcctcgcgacgaccgac
ccgctgaaactccccgcaacgatcctcagccggacccagcacttccgtttcaagaaaatt
tcgaaccaggatgtcagcgcgcacctgcgccacatcctcaaccttgagaatatcacctac
gagcccgaagcgctgcagatcctcgcccgcagcggttcggggagtctgcgcgacaccctg
accctgctggaccaggctattatctattccaagcaccacgtcgacgtctccaccgtcacg
gagatgctgggccttatcgacccgcagtttttcgagtcgctcttcggtgtcatattctca
aaggaccgcgcactgctcgtcaacaccctccgggagctggaggcctacgaagcggagatg
gtcgtcgacgaactcacctcctggctcaaagagcgcctctacgaccatgacgactcccgc
ttctctcccctgctgctggagcgctttttccgcatcctcagcgaggcaaagtccctcttc
gccatcaatgccgaagggagctttgtcctggggctgatcttcttcaagatgatcgaagcg
ctgaaggtcaaagagatcgaccagatgatcgaatccctcgaagcccaggtcgcccgcccc
gacagcgtcgcctatgcgtccgctcccgctgccacagccgcccctgctgtccccactgcc
accgcagcaccagccgcagtcaacgaagaggcgccggaaacgccggccgcagccgaaccg
gagccggtcgtcgcaccggcgcccgaccccgcgctggcgaagttcgaagcgctctgcgca
cgcatcgaggaccgcagcgcggatctcggcaaatgtttccgcgaacagatcacctttatc
gcttacggcgatgacaccctcacctgggagagctgcgccgacgacgactgccgcgccaag
ctcaaacacggtttcccggtgatcaaacagctggtgcgggaggtgttcggattcgagacg
aaaatcaagcacaacccctgctcgcaaccggcagaggaagctgtcccaaagcctgaaccg
gtttccggaccggtaaacgtagcgggtacggtaccgacaccagaatctgctccgatgcca
gaaagcgcttatggttcaggggagagtgtgtcaccggtagaagagatggaagagcgcccc
gcctatatggagagctacagtgctgcggaagaggcgccccagagcgcctcgatgaccgaa
gaggtcgaaacgggttcgggcagctgcgttaccgggaactgtgaaccggacctgagcacc
cgggagatcgacggcaatgccattctcgacgagccgatgatccagaaagcgaccgagctc
ttcgaagcgacgaagatcacgatccagaataaggtatag
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