Thiomicrolovo sulfuroxydans: LOH54_02865
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Entry
LOH54_02865 CDS
T11233
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
tsul Thiomicrolovo sulfuroxydans
Pathway
tsul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tsul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LOH54_02865 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsul03021
]
LOH54_02865 (rho)
03019 Messenger RNA biogenesis [BR:
tsul03019
]
LOH54_02865 (rho)
Transcription machinery [BR:
tsul03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
LOH54_02865 (rho)
Messenger RNA biogenesis [BR:
tsul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LOH54_02865 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
ATPase_2
OB_RNB
Spore_III_AA
OB_RNR_1st
S1CSD-TOTE-2
AAA
Motif
Other DBs
NCBI-ProteinID:
UFS63076
LinkDB
All DBs
Position
complement(573740..575062)
Genome browser
AA seq
440 aa
AA seq
DB search
MSDTSRSNNSRNNKNRTHKPVEGYTVEALREKTIDELVTMAEELGVESPNELKRQDIIFE
ILKAQTAQGGFILFTGILEVMQDGYGFLRSVDKSFSDSLNDAYVSSTQIKRFALRNGDVV
TGQVRAPKDQERYYALLKIEAINYVPPEESKKRPLFENLTPLYALEQLKLEYQPTHLTGR
MMDLFAPIGKGQRGLIVAPPRSGKTELMKEIAHGISHNHPEAELMVLLVDERPEEVTDME
RSVKGEVYSSTFDMPAKNHVKVAEMVIERAKRRVEIGKNVVILLDSITRLARAYNTVTPS
SGKVLSGGVDANALHKPKRFFGAARNIENGGSLTIIATALIETGSRMDEVIFEEFKGTGN
SEVVLSRKISDRRIFPAIDILKSGTRKEELLIGPDVLQKVFILRSMLHKQEDEVEALRFL
YTKMQKTKSNDEFLSMMNEG
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatacttcgcgcagcaacaattcacgaaacaataaaaacaggacccataagccc
gtcgaaggctacactgtagaggccctcagagaaaagacgatcgacgaactcgtcaccatg
gccgaagagctcggtgtcgagagccccaacgagctcaaacgccaggacatcatcttcgaa
atcctcaaggcgcagacggcccagggaggctttatcctcttcaccggtattctcgaagtg
atgcaggacggctacggcttcctccgctccgtcgacaagagcttcagcgactccctcaac
gatgcctatgtctccagcacccagatcaagcgcttcgccctgcgtaacggggacgtcgtc
accggccaggtccgtgcgccgaaggaccaggagcgctactacgccctgctgaagatcgag
gccatcaactacgtaccacccgaagagagcaagaagcgcccgctcttcgaaaacctcacg
cccctctatgccctggagcagctcaagctcgagtaccagccgacccatctcaccggccgc
atgatggacctcttcgcccccatcggtaaagggcagcgcgggctcatcgtcgccccgccg
cgttcgggtaaaacggagctcatgaaagagatcgcccacggtatcagccacaaccacccg
gaagcggaactgatggtcctgctcgtcgacgaacgccccgaagaggtcaccgacatggag
cgctccgtcaagggcgaggtctactcctccaccttcgacatgccggcaaagaaccacgtc
aaggtcgccgaaatggtcatcgagcgtgccaagcgccgcgtcgagatcggcaagaacgtc
gtcatcctgctggactccattacccgcctcgcccgcgcctacaacaccgtgacaccgagt
tcgggcaaagtcctgtcgggcggtgtcgacgccaacgccctgcacaaaccgaaacgcttc
ttcggtgccgcccgtaacatcgagaacggcggctccctcaccatcatcgcgacagccctg
atcgagaccgggagccgtatggatgaggtcatctttgaagagttcaaagggacgggtaac
tccgaggtcgtcctcagccgcaagatctccgaccgccgtatcttcccggcgatcgacatc
ctcaaatccggtacccgcaaagaggagctccttatcgggccggacgtcctgcaaaaggtc
tttatcctccgctccatgctgcacaagcaagaggacgaggtcgaagcgctccgcttcctc
tacaccaagatgcaaaagacgaagtccaacgacgaattcctctctatgatgaacgagggc
taa
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