Thiomicrolovo sulfuroxydans: LOH54_03015
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Entry
LOH54_03015 CDS
T11233
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
tsul Thiomicrolovo sulfuroxydans
Brite
KEGG Orthology (KO) [BR:
tsul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsul03009
]
LOH54_03015 (rimO)
Enzymes [BR:
tsul01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LOH54_03015 (rimO)
Ribosome biogenesis [BR:
tsul03009
]
Prokaryotic type
ribosomal protein modification factors
LOH54_03015 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
SQAPI
TAF1C_C
Motif
Other DBs
NCBI-ProteinID:
UFS63102
LinkDB
All DBs
Position
complement(598931..600250)
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AA seq
439 aa
AA seq
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MSTKKLHIVSLGCTKNLVDTEVMMGRLQSYELTPESEDADVIIVNTCGFIDAAKEESLNT
VLSLDASRKEHSVLVMAGCLSERYKEELSKELSEVDIFTGVGDYDKIDELLAAKQSRFSE
EVYLIDGAERVVTGSTYHAYIKLSEGCNQSCSFCAIPSFKGKLHSRTLESIAAEVEGLVK
KGYYDFSFISQDSSSFLRDQGFKDGLIQLIKRIELIEGVKSARILYLYPTTTSMKLLETI
AKSTTFHNYFDMPIQHIDDAMLKIMKRGAGREQTQMLLDYMRKLPESFVRTSFIVGHPGE
TDESFRAMCDYARDFGFDRINVFAYSDEEGTSAYERTDKVDAETIAERAEILGAIAEEAK
LVSLQKMVGREIVLVIDGESDEHEYLLSARDLRWAPEIDGEIYVNDNALDEALSFGVPYR
AKITELVGETLTATVTGHA
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaaaaaaactgcatatcgtctcgttggggtgtacgaagaacctcgtcgacacc
gaagtcatgatgggacggctccaatcgtatgaactgacgcccgaaagcgaagacgccgac
gtcatcatcgtcaatacctgcggcttcatcgacgcggcaaaggaggagtccctcaatacg
gtcctgagcctcgatgcctcccgcaaggagcactcggtccttgtcatggccggctgcctc
agcgaacgctacaaagaggagctgagcaaggagctcagcgaagtggacatcttcaccggc
gtcggcgactacgacaagatcgacgaactcctggccgcgaaacagagccgcttcagcgag
gaggtctacctcatcgacggcgccgagcgtgtcgtcaccggctcgacctaccatgcctac
atcaaactctccgaggggtgcaaccagagctgctccttctgcgccatcccctcctttaaa
ggcaagctccactcccgtaccctggagagcatcgccgccgaagtcgaagggctcgtcaaa
aaggggtactacgacttcagtttcatctcccaggactcaagctccttcctgcgcgaccaa
gggttcaaagacgggcttattcagctcatcaagcgcattgaactgatcgaaggggttaag
agtgcacgcattctctacctctatccaacgacgacatcgatgaaactgctggagacaatc
gcgaagtcaacgaccttccacaactacttcgacatgccgatccagcatatcgacgacgct
atgctcaaaattatgaaacgcggtgccggtcgggaacagacgcagatgctgctcgattac
atgcgcaagctgccggagagtttcgtacggaccagcttcatcgtcggccaccccggcgaa
acggatgaaagcttccgggcaatgtgtgattatgcccgcgatttcgggtttgaccggatc
aatgttttcgcctactccgatgaggagggcacaagtgcctatgagcgtacggacaaggtc
gatgcggagacgattgcggaacgcgccgagatcctgggcgccatcgccgaagaggccaag
cttgtctccctccagaagatggtcggccgcgagatcgttctcgttatcgacggcgagagc
gacgaacacgagtacctcctcagcgcccgcgacctgcgctgggcccccgagatcgacggc
gagatctacgtcaacgacaacgccctcgacgaagcactctctttcggcgtaccttaccgc
gccaagatcactgagcttgtcggggagacactgacggcaaccgttacgggccatgcttga
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