Thiomicrolovo sulfuroxydans: LOH54_03100
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Entry
LOH54_03100 CDS
T11233
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
tsul Thiomicrolovo sulfuroxydans
Pathway
tsul03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tsul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LOH54_03100 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsul03400
]
LOH54_03100 (uvrB)
DNA repair and recombination proteins [BR:
tsul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LOH54_03100 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LOH54_03100 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
Kinesin
T2SSE
Microtub_bd
UB2H
RXLR
Motif
Other DBs
NCBI-ProteinID:
UFS63119
LinkDB
All DBs
Position
complement(614850..616823)
Genome browser
AA seq
657 aa
AA seq
DB search
MGRFEVVTEYAPAGDQPGAIDTLSKSVLQGHRYQTLEGVTGSGKTYTMAKVIEKTQLPTI
IMTHNKTLAAQLYSEFKAFFPNNHVEYFISYYDYYQPEAYIPRQDLFIEKDSSINDELER
LRLSATANLLSYDDVIVIASVSANYGLGDPEEYAKMVQILEVGQEIEQKELLLRLVEMGY
SRNDTYFDSGHLRVSGDVLDIYPPYLEDEAIRVEFFGDEIEAIYTFEVIANKKLEEKEKV
TVYATSQFTVGQEKLSRAVKTIEDELGERLDNLLANEKIVEAQRLKQRTEFDLEMLETVG
MCKGIENYSRHLTAKKPGEAPYTLLDYFAINHDKYMIIVDESHVSLPQFRGMYAGDRSRK
EVLVEYGFRLPSALDNRPLKYEEFIDKAPHYLFVSATPADVELELSAVKAEQIIRPTGLL
DPQIIIKDSDNQVEDLHDEIKKTVEKGDRILVTVLTKKMAESLTTYLADLGIQVQYMHSD
IDAIERNQIIRSLRLGEFDVLIGINLLREGLDLPEVSLVAILDADKEGFLRSETSLIQTI
GRAARNAEGRVVLYAKKMTRSMKAAIDTTTHRREKQMAHNEAHGITPTTVKRKLDENLKL
EETGELYNKRKKMEKMPAAERKKILAELNQKMKEAAKKLEFEEAARLRDEITKIRQL
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
gtgggcagatttgaagtcgtcaccgagtatgcaccggcaggagaccagcccggagcgatt
gacaccctctccaagagcgtcctccaagggcaccgttaccagacccttgaaggtgtcacc
ggaagcgggaagacctatacgatggcgaaggttatcgaaaagacccagctgccgacgatc
atcatgacccacaacaagacccttgccgcccagctctacagcgaattcaaggccttcttc
cccaacaaccacgtcgaatacttcatcagctactacgactactaccagccagaggcctac
atcccgcgccaggacctttttatcgaaaaggacagctccatcaacgacgaacttgaacgt
ctccgcctctcggcgacggccaatctgctcagctacgacgacgtcatcgtcattgcctct
gtctccgccaactacggtctgggggacccggaggagtacgccaaaatggtgcagatcctc
gaggtcggacaggagattgagcagaaggagctgctcttgcgcctcgtggagatgggctat
agccgcaacgacacctacttcgacagcgggcacctgcgcgtcagcggcgacgtgctcgac
atctacccgccctaccttgaggacgaggcgatccgggtggagttcttcggcgacgagatc
gaggccatctacaccttcgaagtgatcgccaacaaaaagcttgaggagaaggagaaggtc
accgtctacgccacaagccagtttaccgtcgggcaggagaaactctcccgggccgtgaag
acgattgaggatgaactcggtgagcggctggacaacctgctggccaacgagaagatcgtc
gaggcgcagcgcctcaaacagcgcaccgagttcgacctcgagatgctggagaccgtcggc
atgtgcaaagggatcgagaactactcccgccacctcaccgctaaaaagccgggcgaagcc
ccctacaccctgctggactacttcgccatcaaccatgacaagtatatgatcatcgtcgac
gagtcgcacgtctccctgccccagttccgcgggatgtacgccggcgaccgcagccgcaaa
gaggtactcgtcgaatacggtttccgtcttcccagcgccctggacaaccgcccgctcaaa
tacgaggagtttatcgacaaggcgccccactacctcttcgtctccgccacccccgccgac
gtagaactggagctcagcgccgtcaaagccgagcagatcatccgcccgacgggcctgctc
gatccgcagatcatcatcaaggactccgacaaccaggtcgaagacctccacgacgagatc
aagaagaccgtcgaaaaaggggaccgcattctcgtgacggtgctgaccaagaagatggcc
gagtcactcaccacctacctggccgacctcggcatccaggtgcagtacatgcactccgat
atcgatgccatcgaacgcaaccagatcatccgcagcctgcgtctaggggagttcgacgtc
ctcatcgggatcaacctgctgcgcgagggcctggaccttccggaagtcagcctcgtcgcc
atcctcgacgccgacaaggagggattcctgcgctcagagacctccctgatccagaccatc
ggccgtgctgcgcggaatgcggaagggcgcgtcgtcctctacgccaagaagatgacgcgt
tccatgaaagccgccatcgacacgacgacccaccgccgcgaaaaacagatggcccacaac
gaggcccacggcatcacaccgacgaccgtcaaacgcaagctcgacgaaaacctcaagctc
gaagagacgggcgaactctacaacaagcgcaagaaaatggagaagatgccggccgccgaa
cgtaaaaagatcctggccgaactgaatcagaagatgaaagaagcggccaagaaactggag
ttcgaagaggcggcccgcctacgcgacgaaatcaccaagatccggcagctctag
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