Thiomicrolovo sulfuroxydans: LOH54_05635
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Entry
LOH54_05635 CDS
T11233
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
tsul Thiomicrolovo sulfuroxydans
Brite
KEGG Orthology (KO) [BR:
tsul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsul03016
]
LOH54_05635 (trmA)
Enzymes [BR:
tsul01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
LOH54_05635 (trmA)
Transfer RNA biogenesis [BR:
tsul03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
LOH54_05635 (trmA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_15
TRM5-TYW2_MTfase
Methyltransf_31
Methyltransf_12
Methyltransf_11
MTS
Cons_hypoth95
Methyltransf_4
PrmA
Motif
Other DBs
NCBI-ProteinID:
UFS63613
LinkDB
All DBs
Position
1106619..1107734
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AA seq
371 aa
AA seq
DB search
MECRHFGRCGSCRWYEEGYEGQLTKKAEEIKAMFAPLYSGAFDIARSAAEGYRARAEFKV
WHVGDTMHFAMNSIDRDGVVLLEECPMVTTPIQALMWPLLDALNAVPEMGRKLFGMDFLA
GRDGDIAVSMLYHRKLDDTWKAQAAEMAARFGISIIGRSRKQKEVIGCDHVIESVDVAER
TYRFKQIENSFTQPNPGVNAQMIGWALKQFEGLGGDLLELYCGAGNFTIPFASRFDRVLA
TEISKSSIHAAKTNMELNDVHNIDFVRMSAEEFVQALDGVREFNRMKGIDLPSYRLDTIF
VDPPRAGMDEASCDFAARHEHILYISCNPETLKRDLEYLTRTHSIEAMAMFDQFPYTHHM
EMGVRLKKAAQ
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtaggcatttcggccgttgcggcagctgccgctggtatgaagagggttacgaa
gggcagttgaccaagaaagcggaagagatcaaagccatgttcgcgccgctgtattcgggg
gcgttcgatattgcacgctctgctgcggaggggtaccgtgcccgtgccgagttcaaggtg
tggcacgtcggtgataccatgcactttgccatgaactccatcgaccgcgacggcgtcgtg
cttcttgaagagtgcccgatggtcaccacacctatccaggccctgatgtggccgctgctc
gatgcgctcaacgccgtgccggaaatggggcgtaaactcttcgggatggatttcctggcc
ggccgcgacggggacattgccgtttccatgctctatcaccgtaaactcgacgatacgtgg
aaggcgcaggcggcggagatggccgcgcggttcggcatcagcatcatcgggcgcagccgg
aagcagaaagaggtgatcggatgcgaccatgtcatcgaatccgtcgacgtcgctgaaagg
acctaccgtttcaagcagatcgagaacagctttacccagcccaaccccggggtcaatgcc
cagatgataggatgggccctgaagcagttcgaggggcttggcggcgacctgctggaactc
tactgcggggcggggaacttcacgatcccgtttgcgtcgcgctttgaccgcgtcctggcg
acggagatctccaagtcctccatccacgcggcgaaaacgaacatggaactcaatgacgtg
cataacatcgattttgtccgcatgagcgccgaggagttcgtccaggccctcgatggggtg
cgcgaattcaaccggatgaagggaatagacctgccgagctaccgtctcgatacgatcttc
gtcgacccgccgcgcgcagggatggacgaggcctcctgcgatttcgccgcccggcatgag
catatcctctatatctcctgcaaccccgagacactcaagcgcgacctggagtacctgacg
cggacgcacagtatcgaagcgatggcgatgttcgaccagttcccctatacgcaccatatg
gaaatgggcgtcaggttgaaaaaagcggcgcaatag
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