Thiomicrolovo sulfuroxydans: LOH54_06895
Help
Entry
LOH54_06895 CDS
T11233
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tsul Thiomicrolovo sulfuroxydans
Pathway
tsul03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tsul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LOH54_06895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsul03400
]
LOH54_06895
Enzymes [BR:
tsul01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LOH54_06895
DNA repair and recombination proteins [BR:
tsul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LOH54_06895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UFS61386
LinkDB
All DBs
Position
1356865..1357527
Genome browser
AA seq
220 aa
AA seq
DB search
MKSYQNAALLQNLYRLKALGFDYCDPVIVNPRNVEGELPDDLASLQRIVANCHLCDLAKI
RRQSMVGTGSGGADLMIIDAYVSMAQDESGDYFAGRSGASLESMITNVLGRPTASVYLTH
AVKCKGAGTQKPTPSECSSCKPYWRKEIELLRPKVIVTLGPDAYRIVTDDSTPFEQVRGH
KIDYDKGTLLVPLYHPQYLLRNPSLKKVTFFDLQNIKAAL
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgtaccagaacgctgcgctactgcagaacctttaccggctcaaagccctgggt
ttcgactactgcgacccggtcatcgtcaacccgcgcaacgttgaaggggagctccccgac
gatcttgcctccctgcagcgcatcgtcgcgaactgccacctctgcgacctggccaagatc
cgccgccagagcatggtcggtacgggcagcggcggcgcggacctcatgatcatcgacgcc
tacgtctccatggcccaggacgagagcggagactacttcgccggccgctccggggcctcg
ctggagagcatgatcaccaacgtcctcggacgccctacggcgtcggtctacctgacccat
gccgtcaagtgcaaaggggccgggacccagaagccgacgccatcggagtgcagcagctgc
aagccctactggcgcaaagagatcgaactgctccgcccgaaggtcatcgtcaccctcggg
cccgacgcctaccgcatcgtcaccgacgacagcacccctttcgaacaggtgcgcgggcac
aagatcgactatgacaaaggcacgcttctcgtgccgctgtaccacccgcagtacctgctg
cgcaacccgtcgctcaaaaaggtgacgttctttgaccttcaaaatatcaaggctgccctg
tga
DBGET
integrated database retrieval system
