Thiomicrolovo sulfuroxydans: LOH54_06990
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Entry
LOH54_06990 CDS
T11233
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
tsul Thiomicrolovo sulfuroxydans
Pathway
tsul00260
Glycine, serine and threonine metabolism
tsul00460
Cyanoamino acid metabolism
tsul00630
Glyoxylate and dicarboxylate metabolism
tsul00670
One carbon pool by folate
tsul00680
Methane metabolism
tsul01100
Metabolic pathways
tsul01110
Biosynthesis of secondary metabolites
tsul01120
Microbial metabolism in diverse environments
tsul01200
Carbon metabolism
tsul01230
Biosynthesis of amino acids
tsul01240
Biosynthesis of cofactors
tsul04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
tsul00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LOH54_06990
09102 Energy metabolism
00680 Methane metabolism
LOH54_06990
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LOH54_06990
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LOH54_06990
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LOH54_06990
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LOH54_06990
Enzymes [BR:
tsul01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LOH54_06990
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
UFS61405
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Position
1379249..1380496
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AA seq
415 aa
AA seq
DB search
MSFLQEFDNEVYALCEKELERQTDHLEMIASENFTLPAVMEAMGSVFTNKYAEGYPQKRY
YGGCEFADAVEQLAIDRACELFGCKFANVQPHAGSQANGAVYAALIKAGDKILGMDLSHG
GHLTHGAKPSFSGKNYQSFTYGVELDGRINYERVMDIARIVQPKIIVCGASAYAREIDFK
KFREIADEVGAILFADIAHIAGLVAAGEHPSPFPYADVVTTTTHKTLAGPRGGLIMTNDE
DIAKKINSAIFPGLQGGPLVHVIAAKAVGFKYNLSEEWKAYAKQVKSNASVLADVIMKRG
YKVVSDGTDNHLVLVSFLDRDFSGKDADAALGRAGITVNKNTVPGEFRSPFVTSGIRIGS
PALTSRGMKEEQFEIIANRICDVLDDIENEAKQAEIKEELKALAQQFVIYSQPTY
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgagctttctgcaagagtttgacaacgaagtctatgccctgtgtgaaaaagagctggag
cgtcagaccgaccaccttgagatgatcgcttccgagaactttaccctgccggccgtcatg
gaggcgatgggttccgtatttacgaacaaatatgccgagggttacccgcaaaaacgttac
tacggcggttgtgaattcgctgacgccgtcgaacagctggccatcgaccgcgcctgcgaa
ctcttcggctgcaagtttgccaacgtccagccccacgccggttcccaggccaacggtgcc
gtctacgccgcgctgatcaaagccggcgacaagattctcgggatggacctgagccacggc
ggtcacctgacccacggcgcgaagccgagcttctctggcaagaactaccagagcttcact
tacggtgtcgaactcgacggccgcatcaactacgagcgcgtcatggacatcgcgcgcatc
gtccagccgaagatcatcgtctgcggtgcttcagcatacgcccgtgagatcgacttcaag
aaattccgtgagatcgccgacgaagtcggtgcgatcctcttcgcggacatcgcccacatt
gccggccttgttgccgccggtgagcacccgagcccgttcccgtacgcggacgttgtcacg
acaacgacgcacaagaccctcgccggcccgcgcggcggtctcatcatgactaacgacgaa
gatattgcgaagaagatcaactccgcgatcttcccgggcctgcagggcggaccgctggtc
cacgtcatcgccgccaaagccgtcggtttcaaatacaacctctccgaggagtggaaagcc
tacgcgaaacaggtcaagtccaatgcaagcgtcctcgccgacgtcatcatgaaacgcggc
tacaaggtcgtcagcgacggtacggataaccacctcgtcctcgtctccttcctcgaccgc
gacttcagcggtaaagacgccgacgcggcactggggcgtgcgggcatcaccgttaacaaa
aacaccgtcccgggcgagttccgctcaccctttgtcacttccggtatccgtatcggttcc
ccggcgctgacatcccgcggcatgaaagaggagcagttcgagatcatcgccaaccgcatc
tgcgacgtcctcgacgatatcgagaacgaagccaagcaggccgagatcaaagaagagctc
aaagccctcgcccaacagttcgtcatctactcccagccgacgtattga
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