Thiomicrolovo sulfuroxydans: LOH54_09425
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Entry
LOH54_09425 CDS
T11233
Name
(GenBank) tandem-95 repeat protein
Organism
tsul Thiomicrolovo sulfuroxydans
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Ortholog
Paralog
GFIT
Motif
Pfam:
Big_9
Cadherin_5
Cadherin_4
He_PIG
aBig_2
CshA_repeat
Cadherin_3
Motif
Other DBs
NCBI-ProteinID:
UFS61874
LinkDB
All DBs
Position
complement(1827529..1832967)
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AA seq
1812 aa
AA seq
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MIKISQVMLSVAAVIAIGGCGGGGSSNNTSSASGGGVVDGYVSGATVFVDSTGEGEHNDT
ELSTVTDANGDFAFEATIIDGTRIYAYGGTDISTGYPFEGRLSTVYDATRPDIVLSPLTT
YVAAIMASDPSITFDAAADTVAANLGVTADQVKNDPMLDSDSFMAAQKVQKVAEVLTAAT
KSDGESFDAAYAKVFESLAATTFSSDFNATELAGQVSADTGVTLDPSIATFVETLAGTID
ALAANVTTVNELDGFGETINTYAEAAEGAIENGDTAAVTELTTTLNDMNTTQVADEIETG
TYVDPMIAALAEVEDALTNNITYLGTNTANDSITADLVLSSPAAAPYDTPDLNLTWSATP
VGVIDVATGAVTRSATADVAVTLKATVANSLVTNNRVFDLVVKRNEFAPVAVADILTLDE
DTNASLNVLANDTDQNGDMLFVSAVSTAGHGVTAINPDGTVTYTPAANYNGPDSFTYTVS
DGTGRSADGNVSVTVISVNDAPTIGGTPATSVDQDAPYSFTPSSGDIDGDTLTFSIVNKP
TWAAFDPATGALTGTPGNGDVGTTADINISVSDGTVTVALPLFSVTVVNVNDAPTIGGTP
ATSVNQDALYTFTPSSGDIDGDTLTFGIANKPAWATFDTATGTLSGTPGNADVGITTGIV
ISVSDSVLTAALAPFDLEVINVNDAPTASAATFQVQTNTQLDGDLNAYASDIDVGDTLTF
TQVGTLAGLTLNSDGTFSFSSASEGNFTFDYQVSDGSLTSAAATVTINVVANLSPVAGDF
AASTDEDTAVLIDVVAHTSDSDGSVDATTVTVSAATDGNLSVDPVTGVVTYMPNANFNGT
DSFTYTIQDNQGATSLPGTVTVTVAPVNDAPTIDPIGNPPAAAVSSPIFEVQVSIADVDG
DALTLSAVSSDSGVAAVSANGTTVAVDPTGVGTATVTVTVDDGVLSAQETFTVTVVADPV
VTDTTFYEGMTLYSYWVEDNGTPAYETYTMSGGTMSTNGYLFDINSSAWVSASFGTNFML
NTADGTWTTEAAVSSTYTISADGTTLSSPFAAYQIAQAEVLDGQTVDIDIGGGMTLPVTF
PSGALHYTMQSKYLVDTYILDWRPMNVSVPYAFMEDFMNNNYGNMIYWDDNSSTGARPQM
NASFTAAVDDTGADVITLSLGMSGYLVSDSDNTQIVGTWTVGNLPNQAELTIFTELNASI
PNYDALMRDGDIFVTLYNGEVWLGAHNAPTAGYVLDSDSSLMGNDIAMGAITTALENYTP
PVPPVTVDEFYALTEIPISQAEWDALAKAQVSLLADMDLWGVWPDSNGTAVYAVNSDGLY
ADSNGTVMFKDINGTVTDSFAFTINPAGTELNVSIPPSGHLFANLGDVYDQAALEAMFGI
TMPAGSVGYKTAHLRLSDEYDFWGMLTSYDVNYSSMTFTTLADFVAANQGGTGGYVFNVN
GTTGIQFNTGDAYTDINSNGTVVLIDFSDMQNPQVVESGSWHVQNDGNGDVIIVELPSMN
WPFAATVMNDGGGDYVAEGEMQPAFTGDIEIKFNIIARDALINYFMSGGGSSTTPTTAND
STLVGAWALGGITTMDALLIIADNDKYMGVQQVLGTNGVIGGVEVGQYTLDASGSFTSAA
PVINTNAGDTAVGATVSDNGDDTATLTSIDGTVVLNRLSSAISPEAGAWIVNQSTTGNIK
FVIMVLDGAGNYMVADIDDSQSSDPVGSEPGTVGRFNMTEFGTYVVETNGTVTMTPAAPT
DESAVCTDTITSGCDTIAGDTNMEFGLTVDDTLGSQVPVNMTVSFDPTNNYMTVDGSMVF
TRVVPGGPTIFQ
NT seq
5439 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagataagccaggtcatgctgtctgtggctgccgtaatcgcgattggcggttgc
ggcggtggcggcagcagtaataatacgagcagcgccagcggcggcggtgtggtggacgga
tatgtatcgggagcgaccgtctttgtcgacagcaccggcgaaggggagcataacgatacg
gagctgtcgacggtgaccgacgcgaacggcgacttcgcctttgaggcgaccataatcgac
ggaacgaggatctatgcctacggcggtaccgatatcagtacgggctacccctttgaaggg
aggctctcaaccgtctatgacgcgacgcgtccggatatcgtcctttcccctttgacaacc
tatgtcgcggcgatcatggcatcggacccgtcgatcacgttcgatgctgcggccgatacg
gtcgcggccaacctcggggtgactgccgatcaggtcaaaaacgacccgatgctcgacagc
gacagctttatggcggcgcagaaagtgcagaaggtcgccgaagtactgaccgccgcgaca
aaaagcgacggcgaatcgtttgacgctgcctatgcgaaagtgtttgaatcgctggcagcc
acgacgttcagcagcgactttaacgcgaccgagctggccggccaggtcagtgccgatacg
ggggtgacgctcgatccgtcgatcgcgacttttgttgaaacgctcgccgggacgatcgat
gcgctcgcggcaaacgtcacgaccgtcaacgaactggacggtttcggcgagacgatcaac
acctacgccgaagccgcggaaggagcgatcgaaaacggcgatacggccgccgtcacggag
ctgacgacgacgttgaacgacatgaacacgacccaggtcgccgatgagatcgaaacggga
acctatgtcgacccgatgatcgccgcgctggcagaggttgaggatgcccttacaaacaac
atcacctacctcgggacgaatacggccaatgacagcattacggccgatctcgtcctgagc
agtcccgccgcggcaccctatgatacgccggatcttaacctgacatggtcggcgacccct
gtgggcgtcatcgatgtcgcgaccggcgccgtgacacgcagtgctacggcggacgtggcc
gtgacgctcaaagcgacggtcgcgaacagcctggtcacgaataaccgtgtatttgacctt
gtcgtcaagcgcaacgagtttgccccggtagcggtggccgacattctgaccctcgacgag
gataccaatgcgtcgctcaatgtcctggcgaacgatacggaccaaaacggcgacatgctc
ttcgtctcggcagtttcaaccgcaggccacggtgtgacggcgatcaatcctgacgggacg
gtgacctacaccccggccgcgaactacaacggcccggacagcttcacctatacggtcagc
gacggcacgggacgcagtgccgacggcaacgtcagcgtgaccgtcatttctgtgaacgat
gcgccgacgatcggcgggacgccggcaacgtcggtcgaccaggatgcaccgtacagcttc
acgccgtcgtccggtgatatcgacggcgacacgctgaccttcagtatcgtcaacaagccg
acgtgggcggcgttcgacccggcaacgggggcgctgacgggtacgccgggcaacggtgac
gtcggtacgaccgccgatatcaatatctcggtcagtgacggtacggtgacggtcgccctg
ccgctcttctccgtgacggtcgtcaacgtgaacgatgcgccgacgatcggcggtacgccg
gcgacgtcggtgaaccaggacgcgctctacacctttacgccgtcttcgggtgatatcgac
ggcgacacgctgaccttcggcattgccaacaagcccgcctgggcaacgttcgacactgcg
acgggtacgctttcgggcaccccgggcaatgccgatgtcggcatcactacggggatcgtt
atctccgtctccgactcggtactgacggcagcgttggcaccgttcgatctggaggtgatc
aacgtcaatgacgccccaacggcgtcggctgcaacgttccaggtgcagacgaatacccag
ctcgacggcgatctgaatgcgtatgcgtcggatatcgatgtcggcgatacgctgaccttc
acacaggtcgggacgcttgccgggctgacactcaacagtgacggtaccttcagcttcagc
agtgcgtccgaaggcaactttacctttgattatcaggtctccgacggcagcctcacaagc
gctgcggcaacggtcaccatcaatgtcgtggccaacctgtcgcccgtcgcaggcgacttt
gcggccagtaccgatgaagatacggcggtgctgatcgacgtggtggcacacaccagcgac
agcgacggttcggtagatgccacgacggtgacggtctccgccgcgacggacggtaacctg
agcgttgacccggtgacgggcgttgtgacctatatgccgaatgcaaactttaacggtaca
gacagctttacctacacgattcaggacaaccagggcgcgacctcgcttccggggacggtc
acggttacggtagcgcctgttaatgacgccccgacgatcgatcccatcggcaatccgcct
gccgcggcggtcagttcgccgatttttgaagtgcaggtctccattgccgatgttgacggc
gatgcactgacgctgagcgcggtatcgtccgattcgggggttgccgcggtttcggcgaac
ggtacgacggtggcagtcgacccgaccggtgtcggtacggcgaccgtgacggtcaccgtc
gacgacggtgttcttagtgcacaggagacctttaccgtaacggtcgttgccgatccggtg
gtaaccgatacgacgttctatgagggcatgacgctctacagctactgggtcgaagataac
ggtacaccggcatacgaaacctatacgatgagcggcggtacgatgagtacgaacggatac
ctgtttgacataaacagtagcgcctgggtttctgcatcgttcggtacaaactttatgctc
aatactgccgacggtacatggacgacggaggcagccgtgtcgtctacctatacgatcagc
gctgacggtacgacactctcttctccctttgcggcgtaccagatcgctcaggcggaagtg
ctggacggccagacggttgatatcgacatcggcggcggtatgacgctgccggtgaccttc
ccctcaggcgctctgcactatacgatgcagagcaagtatcttgtcgatacatacatcctt
gactggcgcccgatgaatgtcagcgtgccatacgctttcatggaagatttcatgaacaac
aactacgggaacatgatctactgggacgataacagctcgacaggggcacggccgcagatg
aatgcctcctttactgcagcggtggatgatacgggtgctgacgtcataacgctcagcctg
ggaatgagcggctacctggtcagtgacagcgataacactcaaatcgttggtacctggacg
gtcggcaatcttccgaatcaggcagagctgacgatcttcaccgaactcaatgccagtatc
ccgaattacgatgcattgatgcgagacggcgatatcttcgtgacgctgtacaacggcgag
gtctggctgggggcgcacaatgcaccgacggctggctatgtgcttgacagtgacagcagt
ctgatggggaatgatatcgcaatgggtgcgattacaacggcactcgaaaactacacaccg
ccggtaccgccggtaacggtggatgagttctacgcgttgaccgagatccccatcagtcag
gcggagtgggatgcccttgccaaggcccaggtctccctccttgccgatatggacctgtgg
ggcgtctggcccgacagcaacggtacggcggtctatgcggtcaattccgacgggctctat
gccgactcgaacggtacggtcatgttcaaggatatcaacggcacggtgacggatagtttt
gctttcacgatcaatcctgccggtacggagctcaatgtctctattccgccgagcggccat
ctctttgcaaacctgggagatgtctatgaccaggcggcactcgaagcgatgttcggcatc
accatgcctgcgggctccgtcggatacaaaacggcgcacctgcgcttgagcgacgaatac
gatttctgggggatgctgacatcttatgatgtgaactactcctccatgacgttcacgacg
ctggcggacttcgtcgcggccaaccaaggcggcacgggcggttacgtcttcaacgtcaac
ggcactaccggtatccagttcaataccggcgatgcttatacggatatcaacagcaacggg
acggtcgtgctgatcgatttcagcgatatgcagaacccgcaggtcgtggaaagcggcagc
tggcatgtccagaatgacggcaacggcgatgtcatcatcgtcgagctgccgagtatgaat
tggccgttcgccgcgacggtgatgaacgacgggggcggcgattatgtcgccgagggcgaa
atgcaaccggcgtttacgggcgatatcgagatcaagttcaatatcatcgcccgcgatgcg
ctgatcaattactttatgagtggagggggcagcagcaccacgcctacgaccgccaacgat
tcgacgctggtcggtgcctgggcgttgggcggcatcacgacgatggacgccctcctgatc
atcgccgataacgacaagtacatgggggttcagcaggtcctgggcacgaacggtgtcatc
ggcggcgtggaagtcggtcagtacacgctcgacgcctccggcagcttcacctcggccgcc
ccggtgatcaacaccaatgccggcgatactgccgtgggagcgacggtgagcgataacggc
gatgatacggcaacgttgaccagcattgacggtacggtggtattaaaccgtctgagcagt
gcaatcagtccggaagcgggggcatggatcgtcaaccagtcgacgaccggcaacatcaaa
tttgtcatcatggtcctggacggcgccggcaactatatggttgccgacattgacgacagc
cagagctccgatccggtcggttcagaaccggggaccgtcgggcgctttaacatgaccgag
ttcggtacctatgtggtcgaaacgaacggcacggtaacgatgacgccggctgccccgacg
gacgagagcgcggtctgtaccgatacgattacctccggatgcgatactatcgccggcgac
acgaacatggagttcggcctgacggtcgacgatacgctcgggtcgcaggtcccggtcaac
atgacggtcagtttcgatccgaccaacaactacatgacagtcgacggcagcatggtgttc
acccgggtcgtacccggcggaccgacgatcttccagtaa
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