Thiomicrolovo sulfuroxydans: LOH54_09600
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Entry
LOH54_09600 CDS
T11233
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
tsul Thiomicrolovo sulfuroxydans
Pathway
tsul00220
Arginine biosynthesis
tsul00240
Pyrimidine metabolism
tsul00250
Alanine, aspartate and glutamate metabolism
tsul01100
Metabolic pathways
tsul01110
Biosynthesis of secondary metabolites
tsul01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
tsul00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LOH54_09600 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LOH54_09600 (carB)
00220 Arginine biosynthesis
LOH54_09600 (carB)
Enzymes [BR:
tsul01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
LOH54_09600 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_5
ATP-grasp_4
Peptidase_S66
Motif
Other DBs
NCBI-ProteinID:
UFS61909
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Position
1869242..1872499
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AA seq
1085 aa
AA seq
DB search
MPKRDDIKTILLIGSGPIVIGQACEFDYSGTQAVKTLKELGYRVVLINSNPATIMTDPEF
ADRTYIEPIKEEIIAQIIAKENVDAILPTMGGQTALNAAMSMYEKGMLDGIEFLGANPEA
IKKGEDRQAFKEAMIKLGMDLPHSRYAYNMDEALAAAEEIGFPIIIRASFTLAGGGSGVA
YNIDEYKLLAQRGLDESPITEILVEESLLGWKEYEMEVIRDRADNCIIVCSIENFDPMGV
HTGDSITIAPALTLTDKEYQRMRDASFEILREIGVDTGGSNVQFSVDPKTGRMIVIEMNP
RVSRSSALASKATGYPIAKVATLLAVGFTLDEITNDITGTPASFEPVIDYIVTKTPRFTF
EKFPEAENTLTTGMKSVGEAMAVGRTFKESMQKALCSLETGLSGFDEIAGDMDHIRHEIR
RPNAERMLYVAEGFRRGMDVEELFELSNIDPWFLYQIEEIVAEEQTVDLDILNDAARLRK
AKANGFSDKKIAQLIAKQGAGDIRESDVYNARKRMGIHLEYNEVDTCAAEFEALTPYLYS
TTNITTLPEQPTRASDKKKVMILGGGPNRIGQGIEFDYCCVHAAFALEEMGIETIMYNCN
PETVSTDYDTSDVLYFEPIDLEHVREVIEYEKPNGVIVHFGGQTPLKLANPLTAIGAQIA
GTPAKVIDLAEDREKFSDFVTKHDLKQPDNGIATTKEEAISVASRLGYPVLVRPSFVLGG
RAMRIVYKEEELRQYMEEAVSVSNDAPVLVDKFLDQAVELDVDAICDGSEVYIGSVMQHI
EEAGIHSGDSACSLPPVNLSDALLAQVEQQTKTIALGLGVIGLLNIQYAIYQNEVYLIEV
NPRASRTVPFVSKATGMPLAKVATRVMMGDTLRNALAFYDRYDIVIEGDGLLKPRLRDHI
ALKEAVFPFNKLYGADLVLSPEMKSTGEVMGISSSFGVSFAKSQMAAGNRIPTSGTCFLS
FITMDKPAGVEIARGLHEHGFKLVATRGTQKVIEEAGIPCEPVLKISEGRPNIEDMMKNG
DITMAINTSDNNTSKKDAIVIRQIVLRMNIPYFTTLSAARAAIDALGHMKDDAWTAPQAL
QDYLA
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgcgatgacatcaaaacgattctgctcatcggctccggcccgatcgtaatc
ggtcaggcctgcgaattcgactactccggcacccaggcggtcaaaacgctcaaagagctc
ggctaccgtgtcgtcctgatcaactccaacccggcgacgatcatgacggacccggagttt
gccgaccgtacttacatcgagccgatcaaagaagagatcatcgcccagatcatcgcaaaa
gagaacgtcgacgcgatcctgccgaccatgggcgggcagacggccctgaatgccgccatg
agcatgtacgaaaaaggaatgctcgacggcatcgaattcctcggcgccaatcccgaagcg
attaaaaaaggcgaggatcgccaagcgttcaaggaagcgatgatcaagctcggcatggac
ctgccgcattcgcgctacgcctacaacatggacgaagcgctcgcggcggccgaagagatc
ggcttcccgattatcatccgtgcctcttttaccctcgccggcggcggttcgggcgttgcc
tacaacatcgacgagtacaaactgcttgcccagcgcggtctggatgagagcccgatcacc
gagatcctcgtcgaagagtccctcctggggtggaaagagtacgagatggaagttatccgc
gaccgcgccgacaactgcatcatcgtctgttccatcgagaacttcgacccgatgggcgtc
cataccggcgactccatcacgatcgccccggcactgacgctgaccgacaaagagtaccag
cgcatgcgtgacgcctccttcgagattctgcgcgagatcggcgtcgataccggcggttcc
aacgtccagttctccgtcgatccgaaaacggggcgcatgatcgtcatcgagatgaacccc
cgcgtctcccgctcctcggcgctggcgtccaaagcgacgggctaccctattgccaaagtc
gcgaccctgctcgccgtcggctttaccctcgacgagatcaccaacgatatcaccgggacg
ccggcctccttcgaaccggttatcgactacatcgtcaccaagacgccgcgcttcaccttc
gagaagttccccgaagccgaaaacaccctgacgacgggaatgaaatccgtcggcgaggcg
atggccgtcggccgcaccttcaaagagtccatgcaaaaagcgctctgctcgctggaaacg
ggcctctccggctttgacgaaatagcgggcgacatggaccacatccgccacgagatccgc
cggccgaacgccgagcggatgctctacgtcgccgaaggcttccgccgcggcatggacgtc
gaggagctctttgaactctccaacatcgatccgtggttcctctaccagatcgaagagatc
gtcgccgaagagcagacggtcgacctcgatatcctcaacgacgcggcccgcctgcgcaag
gcaaaagccaacggcttcagcgacaagaagatcgcccagctcatcgccaagcagggtgcg
ggcgacatccgcgagagcgacgtctacaacgcgcgcaaacgcatgggcatccacctcgag
tacaacgaagtcgacacctgtgccgccgagttcgaggcgctgacgccctacctctactcc
acgacgaacatcacgaccctgcccgaacagccgacgcgcgcttcggacaagaaaaaagtg
atgatcctcggcggcggcccgaaccgcatcggccaggggatcgagttcgactactgctgt
gtccacgcggcgttcgccctcgaggagatggggatcgagacgatcatgtacaactgtaac
cccgaaaccgtctcgaccgactacgacacctccgacgtcctctacttcgagccgatcgat
ctcgagcatgtccgcgaagtcatcgaatacgagaaaccgaacggcgttatcgtccacttc
ggcggccagaccccgctgaagctcgccaacccgctgacggccatcggcgcgcagatcgcg
gggaccccggccaaggtgatcgacctcgccgaggaccgcgaaaagttctccgacttcgtg
accaagcatgacctcaagcagcccgacaacggcatcgcgacgaccaaagaggaggcgatc
agcgtcgcttcgcgtctgggctacccggtcctcgtacgcccctccttcgtcctcggcggc
cgcgcgatgcgtatcgtctacaaagaggaggagctgcgccaatacatggaagaagcggtc
tccgtctccaacgacgcgccggtgctcgtcgacaagttccttgaccaggcggtcgagctc
gacgtcgacgccatctgtgacggcagcgaggtctatatcggctcggtaatgcagcacatc
gaagaggccggtatccactccggcgactccgcctgttcgctgccgccggtcaacctcagc
gatgcgctgctcgcacaggtcgagcagcagacgaaaacgattgccctcggcctcggtgtc
atcggcctgctgaacatccagtacgccatctaccagaacgaggtctacctcatcgaggtc
aatccgcgcgcatcgcgtaccgtccccttcgtctccaaggcaactgggatgccgctggcc
aaagtcgcgacacgcgtcatgatgggcgacaccctgcgcaacgcgctggccttctacgac
cgctacgatatcgtcatcgaaggcgacgggctgctcaaaccgcgcctgcgcgaccacatc
gccctcaaagaggcggtcttcccgttcaacaaactctacggcgccgacctggtcctgagc
ccggagatgaaatcgaccggcgaggtcatggggatcagctccagcttcggtgtgagcttc
gccaagtcgcagatggcggcgggcaaccgtatcccgacttcgggaacctgtttcctctcc
ttcatcacgatggacaaacctgccggcgtcgagatcgctcgcggactgcatgaacacggc
ttcaagctcgtcgccacccgcggcacccagaaggtgatcgaagaggcgggcatcccgtgc
gaaccggtcctcaagatctccgaaggacgcccgaacatcgaagacatgatgaaaaacggc
gacatcaccatggcaatcaatacctccgacaacaacacgtcgaaaaaagatgccatcgtc
atccgacagatcgtcctgcggatgaacatcccctatttcacgacgctcagcgccgcccgc
gccgcgatcgatgcgctcggccacatgaaggacgatgcttggaccgccccgcaagccctt
caagactacctggcctga
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