Thiomicrolovo sulfuroxydans: LOH54_09940
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Entry
LOH54_09940 CDS
T11233
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tsul Thiomicrolovo sulfuroxydans
Pathway
tsul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tsul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LOH54_09940 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsul03019
]
LOH54_09940 (groL)
03110 Chaperones and folding catalysts [BR:
tsul03110
]
LOH54_09940 (groL)
03029 Mitochondrial biogenesis [BR:
tsul03029
]
LOH54_09940 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsul04147
]
LOH54_09940 (groL)
Enzymes [BR:
tsul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LOH54_09940 (groL)
Messenger RNA biogenesis [BR:
tsul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LOH54_09940 (groL)
Chaperones and folding catalysts [BR:
tsul03110
]
Heat shock proteins
HSP60 / Chaperonin
LOH54_09940 (groL)
Mitochondrial biogenesis [BR:
tsul03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LOH54_09940 (groL)
Exosome [BR:
tsul04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LOH54_09940 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LOH54_09940 (groL)
Exosomal proteins of breast cancer cells
LOH54_09940 (groL)
Exosomal proteins of colorectal cancer cells
LOH54_09940 (groL)
Exosomal proteins of bladder cancer cells
LOH54_09940 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5891
Motif
Other DBs
NCBI-ProteinID:
UFS61969
LinkDB
All DBs
Position
complement(1927882..1929519)
Genome browser
AA seq
545 aa
AA seq
DB search
MAKEIHFSDEARNTLAAGVQKLTDAVKVTMGPRGRNVLIQKSFGSPNITKDGVSVAREIE
LKDPLEDMGAQLVKQVASNTADEAGDGTTTATVLANAIFQEGLRNITAGANPVEVKRGMD
KATEAILAELKAISKSIKDKTEIAQVATISANSDSEIGNMIAEAMEKVGQDGVITVEEAK
GISDELDVVEGMQFDRGYLSPYFITNSEKMIAEIENPFILLFDQKISNLKDLLPVLEQIQ
KTNRPLLIIAEDVEGEALATLVVNKLRGILNISAVKAPGFGDRRKAMLQDIAILTGGQVI
SEEIGRTLESANLADLGQASRVVIDKDNTTIVDGIGDSAAVQARINEIKTQIEATTSEYD
KEKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIR
AASKVQLDLEGDQKIGYEIILRAVKAPVKQIAANAGFDTGVVVNGIETAASENVGFNAAT
GEYVDMFEAGIIDPLKVERVALTNATSVSSLLLTTEATIHEIPEEKPAAPDMGGMGGMGG
MPGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagagattcatttttcggatgaagcacgcaatactctcgccgcaggcgtacag
aagctgacggacgcggtcaaggtcaccatgggaccgcgcggacgcaacgtcctgatccag
aaaagtttcggttctccgaacatcaccaaagacggtgtttccgtcgcccgtgagatcgaa
ctgaaagatccgctcgaagacatgggcgcgcagctggttaagcaggtcgcctccaacacg
gccgacgaggcgggtgacggtacgacgacggcgacggtccttgccaacgccatcttccag
gaaggcctgcgcaacatcaccgcaggcgcgaacccggtagaggtcaagcgcggtatggac
aaggcgaccgaagcgatcctcgccgagctcaaagccatctccaaatccatcaaggacaaa
acagagatcgcccaggtggcgacgatctccgcgaactccgacagcgaaatcggcaacatg
atcgccgaagcgatggaaaaagtcggtcaggacggtgttattaccgttgaagaggcaaag
ggtatcagtgatgaactcgacgtcgtcgaggggatgcagttcgaccgcggctatctcagt
ccctacttcatcaccaacagcgagaagatgatcgcggagatcgaaaacccgttcatcctg
ctcttcgaccagaagatcagcaacctcaaagacctgcttccggtcctcgagcagattcag
aaaacgaaccgtccgctgctcatcatcgcggaagacgtcgaaggcgaagcgctggcgact
ctcgttgtcaacaaactgcgcggcattctcaacatctccgcggttaaagcaccgggcttc
ggtgaccgccgcaaggcgatgctgcaggatatcgctattctcaccggcggccaggtgatc
tccgaggagatcggacgcacgctggagtccgcgaaccttgccgacctcggccaggcgtcc
cgcgtcgtcatcgacaaggacaacacgaccatcgtcgacggtatcggcgacagcgcggcg
gtccaggcgcgtatcaacgagatcaagacgcagatcgaagcgacgacctccgagtacgac
aaagagaagctccaggaacgcctggcgaagctctccggcggtgtggcggttatcaaagtc
ggtgccgcgacagagacggaaatgaaagagaagaaagaccgcgtcgacgatgccctttcc
gcgacgaaagccgccgtggaagaggggatcgttatcgggggcggtgctgcgctgatccgt
gccgcgtccaaggtgcagctcgacctcgaaggcgaccagaagatcggctacgagatcatc
ctgcgcgccgttaaagcaccggtcaagcagattgctgccaatgcgggctttgacacgggc
gtcgtcgtcaacggtatcgagacggctgcgagcgagaacgtcggctttaatgcggcaaca
ggcgagtatgtcgacatgttcgaagcgggcatcatcgacccgctcaaagtcgagcgcgtc
gccctgacaaacgcgacttccgtctccagcctcctgctgacgacggaagcgacgatccac
gagatcccggaagagaagccggccgcaccggatatgggcggcatgggcggcatgggcggt
atgccgggtatgatgtga
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