Thiomicrolovo sulfuroxydans: LOH54_10530
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Entry
LOH54_10530 CDS
T11233
Name
(GenBank) 3'-5' exonuclease
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
tsul Thiomicrolovo sulfuroxydans
Pathway
tsul03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tsul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LOH54_10530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsul03400
]
LOH54_10530
DNA repair and recombination proteins [BR:
tsul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LOH54_10530
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
QSregVF_b
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
UFS62082
LinkDB
All DBs
Position
complement(2053484..2054233)
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AA seq
249 aa
AA seq
DB search
MAKFVLLDTETTGAGETDRIIQLGFIVLEAGQQTEVYNDFCSAEVPIAFGAMEVHHITPE
MIEGKPLCTETAAYRALMALNRDENYLVIHNAPFDLGMLEKEGFANGMKLIDTLRCARHV
FEEEEAHRLQYFRYKMGLYKEEAAEAQKLGVEIKAHDAIGDVLTLKLFLSRLRARVQERF
PGENPVEKMVALTKEPVFYKGPMRFGKYKGKTLFEIAADDRGYLQWMMDKMENLDDDMRY
SVNRVLSGV
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaattcgtattgctggacacggagacgacgggggcaggggaaacggaccgcatt
atccagcttggattcattgtcctggaagcgggacagcagacggaggtttacaacgatttc
tgttccgcggaagtgccgatcgcgttcggcgcgatggaagtgcaccacattacgccggag
atgatcgaaggtaaacccctctgtaccgagacggcggcgtaccgggcactcatggcgctg
aaccgggacgagaactacctcgtgatccacaatgccccttttgacctggggatgctggaa
aaagaggggtttgccaatggcatgaaactcatcgatactctgcgctgtgcccgccatgtt
ttcgaagaggaagaggcccaccggctgcagtatttccgctataagatggggctttacaaa
gaggaagcggcggaagcgcagaaactgggggtcgagatcaaggcccatgacgccatcggc
gacgtcctgacgctgaaactctttttgagccgtctgcgcgcgcgtgtccaggagcgtttt
cccggagagaaccctgtcgagaagatggtcgcgctgacgaaggaaccggtcttttacaaa
gggccgatgcgctttggcaaatacaaaggaaagacgctctttgaaatcgcggcggatgat
cgcgggtatctacagtggatgatggataagatggaaaacctggacgacgatatgcgctat
tcggtcaatcgcgttctctcaggcgtgtag
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