Thiomicrolovo sulfuroxydans: LOH54_11140
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Entry
LOH54_11140 CDS
T11233
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
tsul Thiomicrolovo sulfuroxydans
Brite
KEGG Orthology (KO) [BR:
tsul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsul03032
]
LOH54_11140 (gyrA)
03400 DNA repair and recombination proteins [BR:
tsul03400
]
LOH54_11140 (gyrA)
Enzymes [BR:
tsul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LOH54_11140 (gyrA)
DNA replication proteins [BR:
tsul03032
]
Prokaryotic type
DNA Topoisomerases
LOH54_11140 (gyrA)
DNA repair and recombination proteins [BR:
tsul03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LOH54_11140 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
NTase_sub_bind
Motif
Other DBs
NCBI-ProteinID:
UFS62194
LinkDB
All DBs
Position
2179562..2182081
Genome browser
AA seq
839 aa
AA seq
DB search
MSEPLDNSEIENINIEESLQSSYLDYSMSVIIGRALPDVRDGLKPVHRRILYAMDKLNLS
AGAKYKKSARIVGDVIGQYHPHGDTAVYDALVRMAQPFSMRMTLVDGQGNFGSIDGDNAA
AMRYTEARMTKYAGELLKDLDKETVNMIDNYDATTQEPEILPTRVPNLLINGSSGIAVGM
ATNIPPHNPKEVLSALVHLVDNPKATLPDIMHYIKAPDFPTGGTIYGKKGIIDAYETGRG
RIKVRAKTHIEQTRKKEIIVIDELPYMVNKARLIESIANLVKDKQIDGISEIRDESDREG
IRVVIELKRDAMSEIVLNNLFKSTNMQTTFGIIMLSILNQEPRVFPILEMLNHFINHRKT
VIIRRTIFDLEKAKARAHILEGLKKALDHIDAIIKLIRASKDTETAKEGLISEFDFSPVQ
AQAILDMRLQKLTGLEREKIENELKELLELIEYLESVLRSEDVLRGIIKEEFNEVMEVYD
DPRRTDIEDDYDDIDIEDLIPNEPMVVTITHRGYIKRVPLVNYEKQRRGGKGKTAVTTYE
DDFIESFFTCNTHDTLMFVTDRGQLHWLKVYRIPEGSRTAKGKAVVNLIQLQPDEKIQSI
IPTEDFSEEKSLVFFTENGIVKRTNLSEFSNIRSNGVRAIVLDDEDTLITAKIATTETKY
LFILTKYAQCIKFEIDKTRDQGRSTRGVRGIKFKHDGDRVVDANIIDSDEQEILTVSEKG
IGKRTTAGEYRLTNRAGSGVIAMKLNAKTGQHVVGCVIVNENMDMMALTKGGKMIRVDME
SISKSSRNTSGVYIVKGDDVVSISRCPKKEPVTDEEDEGEEGGTESVQIEPEQQSFDLE
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaccgttggataacagcgaaatcgaaaatatcaatattgaagagagtctgcag
agcagctacctcgactactccatgagtgtcatcatcggccgtgcgctcccggacgtacgc
gacggtctcaaaccggttcaccgccgtatcctctacgcgatggacaaactcaatctctcc
gccggggcgaaatacaagaaatccgcccgtatcgtcggggacgttatcggccagtaccac
ccccacggtgataccgcggtttacgatgctctggtccggatggcccaacccttctccatg
cgtatgaccctcgtcgacggccaggggaacttcggttctatcgacggcgacaacgcggca
gcgatgcgttacaccgaagcgcgtatgaccaagtatgctggggagcttctcaaggacctc
gacaaagagaccgtcaatatgatcgacaactacgacgcaacgacccaggagcccgagatc
ctgccgacccgcgtcccgaacctgctgatcaacggttcatccggtatcgccgtcggtatg
gccaccaacatcccgccgcacaatcccaaagaggttctctccgccctcgtgcaccttgtc
gacaaccccaaagcgaccctgccggacatcatgcactacatcaaggcacctgacttcccg
accggcggtacgatctacgggaaaaaagggatcatcgacgcctatgaaaccggccgcggc
cgcatcaaagtccgtgcgaagacccatatcgaacagacccgcaaaaaagagatcatcgtt
atcgatgaactcccctacatggtcaacaaggcgcgcctgatcgaaagcatcgccaacctt
gtcaaggacaaacagatcgacggtatcagcgagatccgcgacgaatccgaccgcgaaggc
atccgtgtcgtcatcgagcttaaacgtgacgccatgagcgagatcgtcctcaataacctt
ttcaagtcgaccaatatgcagacgaccttcgggatcatcatgctctctatccttaaccag
gagccgagagtcttcccgatcctggagatgctgaaccacttcatcaaccaccgcaaaacg
gtcattatccgccgtacgatcttcgaccttgaaaaagcgaaggcgcgcgcgcacattctc
gaaggtctgaagaaggcactggaccacatcgatgcgatcatcaagctgatccgcgccagc
aaggacaccgaaaccgccaaagaggggcttatttccgagttcgatttcagcccggtccag
gcccaggcgatcctcgatatgcgccttcagaagctcaccgggcttgagcgcgaaaagatt
gagaacgagctcaaagagctgcttgaactcatcgagtatctcgagagcgttctgcgcagc
gaagatgtgctccgcggcatcatcaaagaggagttcaacgaggtgatggaggtctacgac
gatcctcgccgtacggacatcgaagacgactacgacgatatcgatatcgaggacctgatc
ccgaacgagccgatggtcgtcaccatcacccaccgcggctacatcaagcgtgtgccgctg
gtgaactatgagaaacagcgccgcggcggcaaaggcaagaccgccgtcacgacctacgag
gatgacttcatcgaaagcttcttcacctgcaacacccacgatacgctgatgttcgtcacc
gaccgcgggcagctgcactggctgaaggtctaccgcatcccggagggctcccgtaccgcc
aaaggcaaagccgtcgtcaacctgatccagctccagccggacgaaaagatccagtcgatc
atcccgacggaggacttcagcgaggagaaatccctggtcttctttaccgagaacggtatc
gtcaagcgtaccaacctcagcgaattctccaacatccgcagcaacggggttcgtgccatc
gtcctcgacgacgaggatacactcattacggcgaaaatcgccacgacggagacgaagtac
ctcttcattctgacgaagtacgcgcagtgcatcaagttcgagatcgacaagacccgcgat
cagggacgcagtacccgtggggtacgcggtatcaagttcaagcatgacggcgaccgtgtc
gttgacgcgaacatcatcgacagcgacgagcaggagatcctcactgtcagcgagaagggg
atcggcaagcgcacaacggcgggcgaataccgcctcaccaaccgcgccggcagcggggtc
atcgcgatgaaactcaatgcgaaaaccggccagcatgtcgtcggttgtgtgatcgttaac
gaaaatatggacatgatggcgctgacaaaaggcggcaagatgatccgcgtcgatatggag
agcatctccaaatcgagccgtaatacgagcggcgtctacatcgtcaaaggcgatgatgtc
gtcagcatctcccgctgtccgaaaaaagagcccgtgaccgacgaagaggatgagggcgaa
gagggcggcacggagagtgtccagatcgagcccgaacagcaatcttttgatttagaataa
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