Thiomicrolovo sulfuroxydans: LOH54_12865
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Entry
LOH54_12865 CDS
T11233
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tsul Thiomicrolovo sulfuroxydans
Pathway
tsul00061
Fatty acid biosynthesis
tsul01100
Metabolic pathways
tsul01212
Fatty acid metabolism
tsul02024
Quorum sensing
tsul04146
Peroxisome
Module
tsul_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tsul00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LOH54_12865
00071 Fatty acid degradation
LOH54_12865
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LOH54_12865
09145 Cellular community - prokaryotes
02024 Quorum sensing
LOH54_12865
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tsul01004
]
LOH54_12865
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsul04147
]
LOH54_12865
Enzymes [BR:
tsul01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LOH54_12865
Lipid biosynthesis proteins [BR:
tsul01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LOH54_12865
Exosome [BR:
tsul04147
]
Exosomal proteins
Exosomal proteins of breast milk
LOH54_12865
Exosomal proteins of breast cancer cells
LOH54_12865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Methyltransf_25
TehB
Methyltransf_11
Methyltransf_23
Methyltransf_31
Methyltransf_12
TPMT
MetW
Motif
Other DBs
NCBI-ProteinID:
UFS62522
LinkDB
All DBs
Position
complement(2514546..2516837)
Genome browser
AA seq
763 aa
AA seq
DB search
MKIGKVWNEKFSREGYLYGTQPNAYLKEVMDSLPQGARILFLGEGEGRNACYAAERGFEA
HAIDASEVGLQKLQEMAKSRGVNVEVSHMDLAHWEPEGRYDAVLCSYLHLEEPLRTAVFV
KALAAVKEDGLFAGEFFATSQIERDSGGPKAPELLYDLKSFEKLKRPWFDCEELEACSIE
LDEGKGHQGLADVIRVRFRHNSDPRFKITLPELTLSALLERSVTEYAERPVLRNVDESVA
LSYAEFGEAVAALKTRLADAGIGIGDRVALCSENMPNWGVVYFAVTTMGAVIVPILPDFH
DNEVRHIITHSQSKAVFASAKKREALDEGILSSLVMLVLTEDLSDDPTFAKRSPTILQKV
KEGVKGSKHADVHYRPSEDDLAAIIYTSGTTGSSKGVMLTHRALTFEALVAQCVVELVAE
DRFLSILPLAHTYECSVGFLLPIVNGASVYYLSKVPTPKILIDAMALVKPTVILSVPLVI
EKIFKNRILSNFHKNALMRALYAVPFIRKALHKIAGKKLLQTFGGELRIFGIGGAPLSPM
VEHFLDDAGFPYAIGYGLTETAPLLAAGAPFKTKVGAIGPAISSVELRIADPDEKGVGTV
WAKGPNVMLGYYKDPEKSAEVLHEDGWFNTEDLGYIDAEGYLFLSGRSKNVILGPSGENI
YPEQLEAKIMEDELVEDALVYEVEKQLVARIHLNYEMLDEHMDITKLSETEQHIEIEKLL
ERIKTETNESVSKFSRIARVIEQREPFVKTPTKKIKRYLYTNG
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcggcaaagtatggaatgagaaattttcacgggaggggtatctgtacggcacc
cagcccaatgcctacctcaaagaggtgatggattcgctccctcagggcgcgcggatcctt
ttcctcggcgagggggagggcagaaatgcctgttacgcggcggagcggggctttgaagcc
cacgccatcgatgcgtccgaagtcggactgcaaaagctgcaggagatggcgaagagcagg
ggagtgaacgtcgaggtctcgcacatggatctggcgcactgggagccggaggggcgctac
gatgcggtgctctgttcgtaccttcacctcgaggagccgctgcgcacggcggtcttcgtc
aaggcgctcgccgccgtcaaagaggacggcctgttcgccggcgagttcttcgcgacgtcg
cagatcgagcgcgactccggcggtccgaaggcgcctgagctgctgtatgatctgaagagc
ttcgaaaagctcaaacgcccctggttcgactgcgaggagctcgaagcatgcagcatcgag
ctggacgaagggaaggggcaccaggggctcgcggacgtcatccgcgtgcgtttccgccac
aacagcgacccgcgtttcaagatcacgctgccggagttgacgctcagtgcactgctggag
cgttcggtcacggaatacgccgagcggcccgtcctgcgcaacgtcgatgagagcgtggcc
ctgagctatgccgaattcggggaagcggtcgccgcgctgaagacgcgcctggccgatgcg
ggcatcggtatcggtgaccgcgtcgcgctttgcagtgaaaacatgccaaactggggggtc
gtctatttcgccgtcacgacgatgggggctgtcatcgtcccgatcctcccggatttccac
gacaacgaagtgcgccatatcatcactcattctcagagcaaggcggtctttgcatcggcc
aagaagcgcgaggcgctcgacgaggggatactctcctcgctggtgatgctggtgctgacc
gaggatctcagcgatgatcccacctttgccaaacgaagccctacgatccttcagaaggtt
aaggagggggtaaagggctctaaacacgctgacgtgcattacaggccctctgaggacgat
ctggcagcgattatctatacttccggtacgacgggtagcagtaaaggggtgatgctgacg
caccgcgccctgacgttcgaggcgctcgttgcgcaatgcgtggttgaattggtagcggag
gaccggttcctctccatcctgccgctggcgcatacctatgagtgttccgtcggctttctg
ctccccattgtcaacggtgccagcgtctactacctctccaaggtcccgacgccaaagatc
ctcatcgacgcgatggccctggtcaaaccgacggtcatcctctccgtaccgctggtgatc
gagaagatcttcaagaaccgcattctgtcgaactttcacaaaaacgcgctcatgcgggcc
ctctatgccgtaccgttcatccggaaggcgctgcataagatcgccggcaaaaagctcctg
cagaccttcggcggcgagctgcgcatcttcggaataggcggggcgccgctttcaccgatg
gtggagcacttcctggatgacgcgggcttcccgtatgccatcggttacggcctgacggag
acggcgccgctgctggcggccggcgcgccttttaagacgaaagtaggggcgatcggtccg
gcgatctcctcggtcgagctgcgcatcgccgacccggacgaaaagggagtcgggacggtc
tgggcaaaggggccgaacgtgatgctcggctattacaaggacccggagaagagcgcagag
gtgctgcacgaagacggctggttcaatacggaggacctcggctatatcgatgcggagggc
tatcttttcctcagcggacgctccaaaaacgtcatactcggtcccagcggcgaaaatatc
tatcccgagcagctcgaggcgaagatcatggaggacgagctggtagaggatgcgcttgtc
tacgaggtcgaaaagcagctggtggcacggattcatctcaattacgaaatgctcgacgaa
catatggacatcacgaagctctccgagacggaacagcacattgagatcgaaaaactgctc
gagcgcatcaaaacggagacaaacgaaagcgtctccaagttctcccgtatcgcacgggtg
atcgagcagcgcgaacccttcgttaaaacgccgacgaagaagatcaaacgttacctctat
acgaacggctaa
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