Terricaulis silvestris: DSM104635_01052
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Entry
DSM104635_01052 CDS
T06781
Symbol
rhlE_1
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
tsv
Terricaulis silvestris
Pathway
tsv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DSM104635_01052 (rhlE_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsv03019
]
DSM104635_01052 (rhlE_1)
Enzymes [BR:
tsv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DSM104635_01052 (rhlE_1)
Messenger RNA biogenesis [BR:
tsv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DSM104635_01052 (rhlE_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Utp25_C
Flavi_DEAD
HEM4
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
QGZ94236
UniProt:
A0A6I6MLY3
LinkDB
All DBs
Position
1092947..1094329
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AA seq
460 aa
AA seq
DB search
MITFQDLGVSAPILKALEAEGYTTPTPIQIQALPIVQKGRDLIGLAQTGTGKTAAFALPI
LDRLHQNRKHAGEKSCRTLVLAPTRELAAQIGDSFRAYGKFLGLSTTVVFGGASMHKQKQ
AMFRGVDILVATPGRLLDHVSQRSIRLDKVEILVLDEADHMMDMGFIHDLRKIATILPRA
RQTLFFSATMPPAIEELAAQFLDRPEKISVAPQSTTAERVQQVVVHVDQSKKQDLLHAML
ADKGMKRALVFARTKHGADRVANKLESAGFNTGAIHGNKSQGQRTRALDDFKRGKTRILV
ATEVAARGIDVDDITHVINFDLPNVPEQYVHRIGRTARAGTDGIAISFCAPDERAYLKDI
ERLTKQPVPVMETDMSLRAPRADDRPVRPKGPAGRNGQQQQRKHAPKKHHASETHGKAHA
KQGHAPSSAREEGDRRDRKGNDVWSNAGPPRRLKRRPARV
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtgatcacattccaagacctcggcgtttccgcgccgatcctgaaggcgcttgaggccgag
ggctacaccactccaactccgatccagatccaggcgctgccgatcgtgcagaagggccgc
gacctgatcggtctggcccaaaccggcaccggcaagaccgcggcgttcgcgctgccgatc
ctcgatcgcctgcatcagaaccgcaaacacgcgggcgaaaagtcgtgccgtactttggtg
ctcgccccaacgcgcgaactcgccgcccaaatcggcgacagcttccgcgcctacggcaaa
ttcctcggcctctcgaccaccgtcgtcttcggcggcgcgtcgatgcacaagcaaaagcaa
gccatgttccgcggcgtcgatatcctcgtcgccacgccgggccgtctgcttgaccacgtc
agccagcgctcgatccgtctcgacaaggttgaaattctcgtcctcgacgaagccgatcac
atgatggacatgggcttcatccacgacctgcgcaaaatcgcgaccatcctgccgcgtgcg
cgccaaacactgttcttctccgccaccatgccgccggcgatcgaagaactcgccgcgcaa
ttcctggatcgcccggaaaaaatctcggttgcgccgcaatcgaccaccgccgagcgcgtc
caacaagttgttgtccacgtcgatcagtcgaagaagcaggacctgctgcacgccatgctc
gccgacaagggcatgaagcgcgcgctggtgttcgcccgcaccaagcacggcgctgaccgc
gtcgccaataagctggaaagcgcgggtttcaacaccggcgccatccacggcaacaaaagc
caaggccaacgcacccgtgcgctggacgacttcaagcgtggtaagacccgcatcctggtc
gccaccgaagtcgccgcccgcggcatcgacgtcgatgacatcacacacgtcatcaacttc
gatctgcccaacgtgccggagcaatacgtccaccgcatcggccgcaccgcgcgcgccggt
acggacggcatcgcgatttccttctgcgcgcccgacgaacgcgcatacctgaaggacatc
gagcgcctgaccaagcaaccggtgcccgtgatggaaaccgacatgtcgctccgcgctccg
cgcgcggacgaccgcccagtccgcccgaaaggccccgccggccgcaacggccagcagcaa
caacgcaagcacgcgccgaagaagcatcacgcttcagagacgcacggcaaagcgcacgcc
aagcaaggccacgcgccgagcagcgcgcgcgaagagggcgaccgtcgcgaccgcaaaggc
aacgacgtctggtccaacgccggcccgccacgccgcctgaagcgcagaccggcgcgcgtc
taa
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