Terricaulis silvestris: DSM104635_01558
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Entry
DSM104635_01558 CDS
T06781
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tsv
Terricaulis silvestris
Brite
KEGG Orthology (KO) [BR:
tsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsv03032
]
DSM104635_01558 (topA)
03400 DNA repair and recombination proteins [BR:
tsv03400
]
DSM104635_01558 (topA)
Enzymes [BR:
tsv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DSM104635_01558 (topA)
DNA replication proteins [BR:
tsv03032
]
Prokaryotic type
DNA Topoisomerases
DSM104635_01558 (topA)
DNA repair and recombination proteins [BR:
tsv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DSM104635_01558 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
UDPG_MGDP_dh_C
Motif
Other DBs
NCBI-ProteinID:
QGZ94728
UniProt:
A0A6I6MMY3
LinkDB
All DBs
Position
complement(1522023..1524656)
Genome browser
AA seq
877 aa
AA seq
DB search
MNVVVVESPAKAKTINKYLGPDYKVLASYGHIRDLPAKDGSVKPDDDFAMDWEIDPKSSK
RVKEIADAMKGADHLILATDPDREGEAISWHVLEALNQRKALKGKTVKRVTFNAITKAAV
QAAMAAPRDIDMELVDAYLARRALDYLVGFSLSPVLWRKLPGSRSAGRVQSVALRIVVDR
EVEIEKFKPQEYWSVDAQLSSTRGDIFPARLSAFEGKKLKRLDIATEAVAHAARDAVKKG
GFKVSAVEAKPTKRNPPPPFTTSTLQQEASRKLGFNASRTMQTAQRLYEAGHITYMRTDG
VSMDEGAMRELRTAIGKQFGNPYVPAEPRKYVSKIKNAQEAHEAIRPTDPTNTPQQLSLD
GDQAKLYDLVWKRAVASQMESASIERTSIDFTEPTGKVELRATGQVILFDGFLKLYQEGR
DDEEDEENRRLPQLKQGESVNVHDVKADQHFTEPPPRYSEASLVKKLEELGIGRPSTYAA
ILEKLRERNYVRMDKNRFIADDRGRLVTAFLENFFAKYVEYDFTADLEGKLDEVSAGSLK
WKTLMREFWTDFSGAITDISDLRITQVLDTLNEVLGPHIFPPKEDGSDPRVCPLCNVGQL
SLRLGKFGAFVGCSNYNGDPPCKFTRPLAGNGDEAQNAIPSDGLPFGDGPAGPVVLKSGR
FGPYFETPNPDDPDKPKRASLPRGWTAESTTPEKALALLALPRQVGMHPSENEMVLAGVG
RYGPYLQMGKMYANLPSIEDVFEIQMNRAVAVIDEKKAGGGKGRFGRAAPAPIKELGESP
VTGKPVRVLNGRYGPYINDGEINANVPNGTKPEDVTLDEALSLLAARLEAGGGKKKKKAP
AAKKAAPKKEATAPKKAAAPRKAAAKKAPAKKAAKKA
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcgtcgtcgtcgaatctccggctaaggccaagacaatcaacaagtatttgggc
ccggactacaaggtcctggcctcgtatggtcatatccgcgatttgccggccaaggacggc
tcggtaaagccggacgacgatttcgccatggactgggagatcgacccgaaatcgtcaaag
cgggttaaggaaattgccgacgccatgaaaggcgccgaccaccttatcctcgccaccgac
cctgatcgcgaaggcgaggccatttcctggcacgttttggaagccctcaatcagcgcaag
gcgctgaagggcaagacggtcaaacgcgtcaccttcaacgcgatcaccaaagcggcggtc
caagccgcgatggccgcgccgcgcgacatcgacatggagctggtggacgcctacctcgcc
cgccgcgcgctcgattatctcgtcggcttctccttatcccctgtgctgtggcgcaagctg
ccgggctcccgttcggctggccgggtgcaatcggtggcgctccggatcgtcgtcgaccgc
gaagtcgagatcgagaaattcaagccgcaagaatactggtcggtcgacgcccagctttcg
agcacgcgcggcgatattttccccgcccgtctctcggccttcgaaggcaagaagctaaag
cgtctcgacatcgccactgaagcggtggcgcatgctgcacgtgatgcagtgaagaaaggc
ggcttcaaggtcagcgccgttgaagcgaagcccaccaagcgcaacccaccgccgccgttc
acgacctcgacgctgcaacaggaagcgtcccggaagctcggcttcaatgcatcgcgcacg
atgcagacggcgcaacgcctctatgaggctggccacatcacctacatgcgtaccgacggc
gtcagcatggacgaaggcgcgatgcgcgagctgcgcaccgcgatcggcaagcaatttggc
aatccgtatgtgcccgctgagccgcgcaagtacgtgtcgaagatcaagaacgcgcaggaa
gcccacgaagcgatccggccaaccgatccgaccaacacaccacagcaactcagcctcgat
ggcgatcaggcgaaactctacgatctggtttggaaacgcgctgtcgcgtcgcaaatggaa
tcggcgtcgatcgaacgcaccagcatcgatttcaccgagccgaccggcaaagtcgagcta
cgcgccaccggccaagtcattctcttcgacggctttctgaagctctatcaggaaggccgc
gacgacgaggaagacgaagaaaatcgccgcctcccgcagctgaagcagggcgagagcgtc
aacgtccacgacgtcaaagccgatcagcacttcactgagccgccaccgcgctattccgaa
gcgagcctggtcaaaaagctcgaagaactcggcatcggccggccgtccacctacgcggcg
atcctcgagaaactgcgcgagcgcaactatgtgcgcatggacaagaaccgcttcatcgcc
gatgaccgcggccgcctcgtcacggcgttcctggaaaatttcttcgccaagtacgtcgag
tacgatttcaccgccgatctggaaggcaagcttgacgaggtctccgccggtagtctgaag
tggaagacgctgatgcgcgagttctggacggatttctccggcgccatcaccgacatcagc
gacctgcgcatcacgcaggtgctcgacacgttgaacgaagtgctgggtccgcacatcttt
ccaccgaaggaagacggcagcgatccacgcgtctgcccgctctgcaatgtcgggcagctt
tcgctacgcctcggcaagttcggcgcgttcgttggctgctcgaactacaatggcgatccg
ccatgcaaattcacgcgtcctctcgccggcaatggtgatgaagcacaaaacgccattcca
tcggacggcttgccgttcggcgacggcccggccggcccggtcgtgttgaagagcggccgc
ttcgggccgtactttgaaacaccaaaccccgacgatcccgacaagcccaaacgcgcaagc
ttgccgcgcggctggaccgctgagtcaacgacgccagaaaaagcgctcgcgctgctcgca
ctgccgcgccaagtcggcatgcatccgagcgagaacgaaatggtgctcgccggcgtcggc
cgctacggcccgtacctgcagatgggcaagatgtacgcgaacctgccttcgatcgaagac
gtgttcgagatccaaatgaaccgcgcggtcgcggtgatcgacgaaaagaaagccggcggc
ggcaaaggccgcttcggtcgcgcggcgccggcgccgatcaaggaactcggtgaaagcccg
gtgaccggcaaaccggtgcgcgtgctcaacggccgctacggcccctacatcaatgacggc
gaaatcaacgccaacgttcccaacggcacaaaaccggaggacgtgacgctggatgaagcg
ctgtcgctcctcgcggcgcgtttagaggccggcggcggaaagaagaagaaaaaggcgccc
gctgcgaagaaagcggcgccgaagaaggaagctacggcgccaaagaaggccgctgctcca
agaaaggccgccgcgaaaaaggcgccggcgaagaaggctgcgaagaaagcctag
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