Terricaulis silvestris: DSM104635_02061
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Entry
DSM104635_02061 CDS
T06781
Symbol
dnaE1
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tsv
Terricaulis silvestris
Pathway
tsv03030
DNA replication
tsv03430
Mismatch repair
tsv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DSM104635_02061 (dnaE1)
03430 Mismatch repair
DSM104635_02061 (dnaE1)
03440 Homologous recombination
DSM104635_02061 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsv03032
]
DSM104635_02061 (dnaE1)
03400 DNA repair and recombination proteins [BR:
tsv03400
]
DSM104635_02061 (dnaE1)
Enzymes [BR:
tsv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DSM104635_02061 (dnaE1)
DNA replication proteins [BR:
tsv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DSM104635_02061 (dnaE1)
DNA repair and recombination proteins [BR:
tsv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DSM104635_02061 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
DUF655
T2SSK
Motif
Other DBs
NCBI-ProteinID:
QGZ95217
UniProt:
A0A6I6MR10
LinkDB
All DBs
Position
complement(1999680..2003096)
Genome browser
AA seq
1138 aa
AA seq
DB search
MTQPFIHLRARSAYSLLQSAVQVKDLVKLAAKHEMPALGLADSNNLFGALEFSEAAAEAG
IQPIVGLALDVKGEGGIAGVLALYAQTNAGYANLMRLSSAAFLDTAGNEDAHVPFTSVLE
HAEGLIALTGGGDGAFAPLLAEGKTDIAEAALKQLAGVFGNRLYVELHRHGERIEADTEG
ALIDLAYKHGLPIVAANDIRFSERKRHKSHDALMCIANSSYLGEEDRPRVTPDHYFKSAK
EMTELFSDLPEAIENTSEIARRCSVRVEKRAPILPRFDTKRGRDEPAELKAQAEAGLRAR
LKALGDRLAAPMEDYEKRLAYELNVITQMQFPGYFLIVSDFIKWAKAQGIPVGPGRGSGA
GSVVAWALTITDLDPLRWGLLFERFLNPERVSMPDFDIDFCQERRGEVIDYVKNKYGEDR
VAHIITFGTLQARAVVRDVGRVMQLPFHMVDKFAKLIPANPANPVTLAQALDTEDKIKEM
RRNEPEIRELTDTALELEGLYRNASTHAAGIVIGDRPLIDLVPLYRDPRAYLPATQFNMK
WVEAAGLVKFDFLGLKTLTVIDRAVKSIRARGVEIDLDATGYDDEATYELMRSGMTFGVF
QLEGQGMRDTLRKVKPTSLEDVIALISLYRPGPMQNIDRFANVKHGREQPDYLHETLQPI
LEETYGVIVYQEQVMQIAQVLSGYSLGEADLLRRAMGKKQPAEMAKQKSRFIDGAKEKGV
NENLASHIFDLVEEFAGYGFNKSHAAAYAVVAYQTAYLKAHFPVDFVAASMSLDISNSDK
LASFYQDARRIGAPVLPPDLNASEADFSVQPTEEGSVAVRYALGALRNVGLAAMETIVAE
RKANGPFKALYDFSERIDPKSVNKRQLENLAKSGSFDTIEPDRARALAACETISLYAQRV
AEERASAQTSLFGAEEPSARPAFPKAPAWSAQDTLDAERESVGFYLSGHPLSDFFLDAGD
RYKTYVDILDDGETEPRSYPMGGVLRRIQYRPAMTGGTLAFVSMSDPTGDFEGMVMPEYV
EQARDVLEVGKAFVFRGRVRWRDGDMKLAADTFEPVEAAEARTQEDLRIVLKEGAPLELL
AQTITALPKPNPGEARPLRLVLRLKDGREIELRARTLVSGAPAARAALKAARGVERVI
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcccttcatccacctccgcgcccgttcggcttactcgctgctgcaaagcgcg
gtgcaggtgaaggacctggtcaagcttgcggccaagcacgaaatgccggcgcttggtctg
gcggattccaacaatctgttcggcgctctcgaattttccgaagccgcggccgaagccggc
atccagcccatcgttggcctcgcgcttgacgtgaaaggcgagggcggcattgccggtgtg
ctcgcactctacgcgcaaaccaacgccggttacgccaacctgatgcgcctctccagcgcc
gcttttctcgacaccgccggtaacgaagacgcgcacgtgccgttcacgagcgtgctcgaa
cacgccgaaggcttgatcgcgctcactggcggcggcgatggcgccttcgcgccgctgctg
gccgaaggcaagaccgacatcgccgaagccgcgctgaagcaactcgccggcgtattcggc
aatcggctctacgtcgaacttcatcgccacggcgaacgcatcgaggccgacaccgaaggc
gcgctgattgacctcgcttacaagcacggcctgccgatcgtcgctgccaacgacatccgc
ttcagcgaacgcaagcgccacaaatcgcacgatgctctgatgtgcatcgccaattcatcg
tacctcggcgaagaggatcgcccgcgcgttacgccggaccactatttcaaatccgccaag
gagatgacggagctgttctccgatctgcccgaagcgatcgagaacacgtccgagatcgcg
cgccgttgttccgtccgtgtcgaaaagcgcgcaccaatcctgccgcgcttcgacaccaag
cgcggtcgcgacgaaccggcggaattgaaggcacaggcggaggccggccttagggcgcgc
ttgaaagcactcggcgatcgcctcgccgcgccgatggaggactacgagaagcggctggcg
tacgagttgaacgtaattacgcagatgcagtttccgggctacttcctgatcgtctcggac
ttcatcaagtgggcgaaggcgcaaggtattccggttggcccgggccgcggttcgggcgcg
ggctccgttgtcgcctgggcgctgacaattaccgacctcgacccgctgcggtggggtctg
ctgttcgagcgcttcctcaatcccgaacgcgtttcgatgccggacttcgatatcgacttt
tgtcaggagcgccgcggcgaagtcatcgactacgtgaagaacaaatacggcgaagaccgc
gtcgctcacatcatcacgttcggtacactgcaagcgcgcgccgtggtgcgcgacgtcggt
cgcgtgatgcagctgccgtttcacatggtcgacaagttcgccaagctgatcccggccaac
ccggcgaacccggtgaccctcgcgcaagcgttggacaccgaagacaagatcaaggagatg
cgccggaacgagccggagatccgcgaactcacggacacggcgctcgaactcgaaggcctc
taccgcaacgcttccacgcacgcggctggcatcgtgatcggcgatcggccgctgatcgat
ctcgtcccgctctaccgcgatccgcgcgcttacttgccggccacccagttcaacatgaag
tgggtcgaagcggcggggctcgtgaagttcgacttcctcggcctgaagacgctcaccgtt
atcgatcgcgcagtgaagtcgatccgcgcacgcggcgtcgagatcgatctcgacgccacc
ggctacgacgacgaagctacctatgaactgatgcgctccggcatgacattcggtgtgttc
cagctcgaaggtcagggtatgcgtgacacgctgcgcaaggtgaagccaacctcgctcgaa
gacgtcatcgcgctcatctcgctctatcgcccgggcccgatgcaaaacatcgaccgcttc
gccaacgtgaagcacggccgcgagcagccggactatctgcacgagacgctgcagccgatt
ctggaagagacgtacggcgtcatcgtctaccaagaacaagtcatgcagatcgcgcaggtg
ctctcaggttatagcctgggcgaagccgatttgctccgccgcgcgatgggtaagaaacag
cccgccgaaatggcgaagcagaagtcgcgcttcatcgatggcgcaaaagaaaagggcgtt
aacgagaacttggcctcccacatcttcgatctggtcgaagaattcgccggctacggcttc
aacaagtctcacgccgccgcctacgccgtcgtcgcgtatcagaccgcttatctcaaagcg
cacttcccggtggacttcgtggccgcctcgatgagcctcgatatctcgaactccgacaag
ctcgcgagtttctatcaagacgcccgccgcatcggcgcaccggtgctgccgccggacctc
aatgcgtcggaagcggatttcagcgtgcaacccacggaagagggcagcgtcgccgtacgc
tatgcgcttggtgcattgcgcaatgttggccttgcggcgatggagactatcgtcgccgaa
cgcaaagccaacggacccttcaaggcgctctacgatttctccgagcgcatcgatccgaag
tcggtcaacaaacgtcaactcgaaaacctggccaaatctggctcattcgacaccatcgag
ccggaccgcgcccgcgcgttggcggcttgcgaaacgatctcgctctacgcccaacgtgtc
gccgaagagcgcgccagcgcgcaaaccagcctgttcggcgccgaagaaccaagcgcgcgc
ccagcgtttccgaaagcgccggcatggtcggcgcaggatacactcgacgccgagcgcgaa
agcgtcggcttctatctctcaggccacccgctgtcggatttcttccttgacgcaggtgat
cgctacaaaacttacgtcgacatcctcgacgacggtgaaaccgagccgcgctcgtatccg
atgggtggcgtgcttcgacgcatccagtatcgccccgccatgaccggcgggacgttggcg
ttcgtctccatgtcagaccccactggcgatttcgagggcatggtgatgcctgagtatgtc
gagcaggcgcgcgatgtgctcgaagtcggtaaggcgttcgtcttccgtggccgcgtgcgc
tggcgcgatggtgatatgaagctcgccgccgacacgttcgagccggtcgaagccgccgaa
gcgcgcacgcaggaggatctccgtatcgtcctgaaagaaggtgcgccgctcgaactcctg
gcgcaaaccatcacggcgttgccgaagcccaatccgggtgaggcgcgtccgctccgactc
gtgctccggctgaaagacggccgcgagatcgagcttagagcgcgcaccttggtgtcaggc
gcgccggccgcccgcgccgcgctgaaagccgcccgcggcgtcgagcgcgtgatctag
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