Terricaulis silvestris: DSM104635_02576
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Entry
DSM104635_02576 CDS
T06781
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
tsv
Terricaulis silvestris
Brite
KEGG Orthology (KO) [BR:
tsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsv03009
]
DSM104635_02576 (rlmD)
Enzymes [BR:
tsv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
DSM104635_02576 (rlmD)
Ribosome biogenesis [BR:
tsv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DSM104635_02576 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Cons_hypoth95
Methyltransf_31
TRM5-TYW2_MTfase
MTS
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
QGZ95725
UniProt:
A0A6I6MK97
LinkDB
All DBs
Position
complement(2478948..2480270)
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AA seq
440 aa
AA seq
DB search
MKRMNRLARARPFQAARQGRSAPPAAPEERILEISAIGGRGDAVTAGAEGPIYAPFALPG
EKVRALVTGGRADVVEVLEPSADRQAAACRHFGRCGGCQLQHWKDGPYLAWKREQVVEAL
ERRGLGGAVVDATIPAWGEGRRRAAFHAARFKGQARIGFIERGGARLTPITQCPVLVPAL
EALALKLGPLAELILPQRGEITLQCLATDAGVDVAIKGAGRPQALHRAALEALSNAANDL
NLARLSMDGEVVVERAKPALRMGRAVVHPPPGAFLQPTAQGEETLSRLAMEALAGAERVI
DLFSGIGTFALRAAEFTDVVAAESDADMLSALKKAADSAGSALRDVQILRRDLLRTPLSS
LEMKKFDAAVIDPPRSGARLQAEQIARSPVRKVAYVSCDAGSFARDVKVMIEHGFQLTRV
TPVDQFRWSPHVEVVGALER
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtatgaaccgcctcgcacgggccaggcccttccaggccgcccgacaggggaga
tcggccccaccggccgcccctgaggagcgaatcctggagatttcggccatcggtggccgg
ggcgacgcggttaccgcgggcgccgaaggcccaatctatgcgccgttcgcgctgccgggc
gaaaaggtgcgcgccttggtcacaggcggccgcgccgacgtggtcgaggtgctggaaccg
agcgccgaccgccaagccgccgcctgccgccatttcggccgctgcggcggctgccagctg
cagcactggaaggacgggccgtacctcgcctggaagcgcgagcaggtggtcgaagcgctc
gaacggcgcggcctcggcggcgccgtcgtcgatgcaaccatccccgcctggggcgaaggc
cgccgccgcgccgccttccacgccgcgcgcttcaaaggccaagcccgcatcggtttcatc
gaacgcggcggcgcgcggctgacgccgatcacgcaatgtcccgtgctcgtgcctgcgttg
gaagctctcgcactgaagcttggccccctcgctgagctcatactgccgcaacgcggcgag
atcacgctgcaatgcttggcgaccgacgcgggcgtcgatgtcgcgatcaagggcgcgggg
cgcccgcaagctttgcaccgcgccgcgctcgaagccttgagcaatgccgccaacgacctg
aacctcgcgcgtctctccatggacggcgaagtcgtcgtcgagcgcgccaagcccgcgctg
cgcatgggccgcgccgtcgtacacccgccgcccggcgccttcctgcaacccacggcgcaa
ggcgaggagacgctttcgcggctcgccatggaggcgctcgctggcgccgagcgcgtcatc
gatctcttctccggcatcggcacctttgcgttgcgcgccgccgaattcaccgacgtcgtc
gccgccgagtccgacgccgacatgctctccgcgctcaagaaagccgccgacagcgccggc
agcgcattgcgcgacgtgcagatcctccgccgcgatttgctgcgcacgccgctctccagc
ctggagatgaaaaagttcgacgccgccgtcatcgatcccccacgctccggcgcccgcctg
caagccgagcagatcgcgcgctcgccggtgcgcaaggtggcctacgtctcctgcgacgcc
ggcagcttcgcccgcgacgtcaaagtcatgatcgaacacggcttccagctgacccgcgtc
accccagtcgatcaattccgctggagtccgcacgtcgaagtggtaggggcgttggaaaga
tga
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