Terricaulis silvestris: DSM104635_03680
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Entry
DSM104635_03680 CDS
T06781
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tsv
Terricaulis silvestris
Pathway
tsv03420
Nucleotide excision repair
tsv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DSM104635_03680 (pcrA)
03430 Mismatch repair
DSM104635_03680 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsv03400
]
DSM104635_03680 (pcrA)
Enzymes [BR:
tsv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DSM104635_03680 (pcrA)
DNA repair and recombination proteins [BR:
tsv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DSM104635_03680 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
DSM104635_03680 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
HHH
AAA_12
Peripla_BP_2
HHH_5
DEAD
Motif
Other DBs
NCBI-ProteinID:
QGZ96818
UniProt:
A0A6I6MTW5
LinkDB
All DBs
Position
complement(3566801..3568819)
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AA seq
672 aa
AA seq
DB search
MSRIISAALDDLNAEQRAAVEHGLEPLLVIAGAGSGKTKTLSCRVAHLVAQGADPSRILL
LTFSRRAASEMIARIGNVMAGDVRIPWAGTFHAIGARLLRELAPVIGIDPEFTIHDRSDS
ADLMGMVRQELGVATGAKRFPMKGTCLAIYSRVVNADESVADALAAAFPWCREWEAELKR
LFAAYVEAKQKQNVLDYDDLLWLWAEAMNEPALAREVGARFDHVLVDEYQDTNKLQARIL
LAMKPDGQGVTVVGDDAQSIYSFRAADVRNILEFPKAYARETRLVTLEQNYRSTVPILEA
SNAVIDLAQERFTKNLRTTRSGGGAPKLVSVRDEVAQASYVAECVLEARERGVALTQQAV
LFRAADFSAPVELELAKRDIPFVKFGGLKFLEAAHVKDFLAILRWAQNGGDRIAGFRTLQ
LVPGVGPAKAARILDAMDETGAYGVVRNTAPPAGAGEAWDTLKGMLDDLRGATWPGDLEL
AARWYGPLMNERYEDARVRTGDVEQLQRIGSTFGSRTSFLTELTLDPPNSTSDESGPAHK
DDDYLILSTIHSAKGQEWKNVFVLNVVDGCMPSDLGAGSTAELEEERRLLYVAMTRAKDE
LHLITPQRFYHTQQGKGGDKHVYAIRSRFVPTNILPKFEQMAWAPGEGVDGVQDRGPLPK
IDLAARARGRFS
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgaatcatcagtgcagctttggacgatctgaacgcggagcagcgcgctgccgtt
gagcatgggcttgagccgctcctggtgattgcgggcgcggggtcggggaagacgaagacg
ttgtcgtgccgcgttgcgcatctggtggcgcagggggccgatccgtcgcgcattttgttg
ctgacgttttcgcggcgcgcggcgagtgagatgattgcgcgcattggcaacgtgatggcc
ggcgatgtgcggattccgtgggcggggacgtttcacgcgattggcgcgcggttgttgcgc
gaactggcgccggtgattggcatcgatccggaatttacgatccacgatcgcagcgatagc
gccgatctgatgggcatggtgcgccaggagcttggcgtggcgacgggcgcgaagcgcttt
ccgatgaagggcacgtgcctcgcgatttattcgcgcgtcgtgaatgcggatgagagcgtg
gccgacgcgctggcggcggcgtttccgtggtgccgcgagtgggaagcggagctgaagcgg
ctgttcgcggcgtatgtggaagcaaagcaaaagcagaacgtgttggactatgacgatctg
ctttggctctgggccgaggcgatgaatgagccggcgttggcgcgcgaggtcggcgcgcgg
ttcgatcacgtgctggtcgatgaatatcaggacacgaacaagctgcaggcgcgcattctg
ctggcgatgaagccggatgggcagggcgtgactgtcgtgggcgatgacgcgcagtcgatc
tattcgttccgcgcggcggacgtgcgcaacatcttggagtttccgaaagcgtacgcgcgt
gagacgcggctggtgacgctggagcaaaattatcgctcgacggtgccgatccttgaggcg
tcgaacgccgtgatcgatttggcgcaggagcgcttcaccaaaaatctgcgcacgacgcgg
agcggcggcggcgcccctaagctggtgagcgtgcgcgatgaggtggcgcaagcgtcgtat
gtcgccgagtgcgtgctggaggcgcgcgagcgcggcgtggcgctgacgcagcaagcggtg
ctgttccgcgcggcggatttttcggcgccagtggagttggagttggccaagcgcgatatt
ccgttcgtgaagtttggcgggctgaagtttctcgaagccgcgcacgtgaaggattttctg
gcgatcctgcgctgggcgcagaacggtggcgatcgcattgcgggtttccgcacgttgcag
ctggtgcccggtgttgggccagcgaaggcggcgcggatcttggacgcgatggatgagacg
ggcgcttacggcgtcgtgcgcaacacggcgccgccggcgggtgcgggcgaggcgtgggat
acgctcaaaggcatgctcgatgatctgcgcggcgcgacgtggccgggtgatttggaattg
gcggcgcgttggtacgggccgctgatgaatgagcgctatgaggatgcgcgtgtgcggacg
ggcgatgtggagcagttgcagcggattggttcgacgtttggctcgcgcacgagttttctc
acggagctgacgctcgatccgccgaactcgaccagcgatgagtcagggccggcgcataag
gatgatgactatctgatcctctcgacgatccactcggccaagggtcaggagtggaagaac
gtgttcgtgctgaacgttgtcgatggctgcatgccgtcggatttgggcgcgggctcgacg
gcggagttggaggaggagcggcggctgctctatgtggcgatgacgcgggcgaaggatgag
ctgcatctcatcacgccgcagcgtttctatcacacgcagcagggcaagggcggcgacaag
cacgtctatgcgatccgctcgcgctttgtgccgacgaacattctgccgaagttcgagcag
atggcgtgggcgccgggggagggcgtcgatggcgtgcaagatcgcgggccgctgccgaag
attgatctcgctgcgcgggcgcgggggcgattcagctga
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