Terricaulis silvestris: DSM104635_03886
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Entry
DSM104635_03886 CDS
T06781
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
tsv
Terricaulis silvestris
Pathway
tsv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DSM104635_03886 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsv03021
]
DSM104635_03886 (rho)
03019 Messenger RNA biogenesis [BR:
tsv03019
]
DSM104635_03886 (rho)
Transcription machinery [BR:
tsv03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DSM104635_03886 (rho)
Messenger RNA biogenesis [BR:
tsv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DSM104635_03886 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_22
S1CSD-TOTE-2
AAA
AAA_25
Mor
NACHT
Motif
Other DBs
NCBI-ProteinID:
QGZ97021
UniProt:
A0A6I6MSA2
LinkDB
All DBs
Position
3752642..3753934
Genome browser
AA seq
430 aa
AA seq
DB search
MTDEQALEELTSMTLQELKRKTPAEILALAESLEIEGANTLRTQDMLFSILKAVAERGVE
IGGAGVCEILSDGFGFLRSPQSSYLPGPDDIYISPQQIRKFGLRTGDTVEGQIKAPKDGE
RYFALTKVNSVNFEDPDKVRHKVHFDNLTPLYPTERLKMEIEDPTLKDKTGRIIDIVAPI
GKGQRSLIVAQPRTGKTVILQNIAKAIEANHPEVFLMVLLIDERPEEVTDMRRTVKGEVI
SSTFDEPATRHVAVAEMVIEKAKRLAEHGKDVVILLDSVTRLGRAYNTVVPSSGKVLTGG
VDANALQRPKRFFGAARNLEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSELQLDRK
VADRRIFPAIDVLKSGTRKDELITPKEHLQKMYVLRRILSPMGTQDAVEFLLDKLKGSKN
NDDFFQSMNT
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgaacaagcactcgaagagctcacgtcgatgacgctgcaagagctcaaacgc
aaaacccccgccgaaattctcgctctcgctgaatcgcttgagatcgagggcgccaacacg
ctccgcacccaggacatgctgttttcgatcctgaaggcggtcgctgagcgtggcgtcgag
atcggcggcgctggggtctgcgaaattctatctgacggcttcggctttcttcgctcgccg
caatcgagctatctgccagggcctgacgatatctacatctcgccccagcagatccggaaa
ttcggcctgcgcaccggtgatacggttgaaggccagatcaaagctccgaaggatggcgaa
cgctatttcgcgctgaccaaggtgaactcggtcaatttcgaagacccggacaaggtccgt
cacaaggttcacttcgacaatctgaccccgctctatccgaccgagcggctgaagatggaa
atcgaagacccgacactcaaagacaaaaccggccgcatcatcgacatcgttgcgccgatc
ggtaaaggccagcgctcgctgatcgtcgcgcagccgcgcacgggtaagaccgtcatcctg
cagaacatcgccaaggcgatcgaagccaaccatccggaagtgtttctgatggtgctgctg
atcgacgaacgccccgaagaagtcaccgacatgcgccgcaccgtgaagggcgaggtcatc
tcctccaccttcgacgaaccggccacgcgccacgtcgcggttgccgaaatggtgatcgag
aaagccaagcgcctcgccgagcacggcaaggatgttgtgatcctcctcgattccgttacg
cgcctcggccgcgcctacaacaccgtcgtgccctcttccggcaaggtgctgacgggcggc
gtcgacgccaacgcgctgcagcgtccgaagcgcttctttggcgcggcgcgtaatctcgaa
gaaggcggttcgctcaccatcatcgcgacggcgctgatcgataccggctcgcggatggac
gaagtcatcttcgaagagttcaagggcaccggtaacagtgaactccagctcgaccgcaaa
gtcgccgaccgccgcatcttcccggctatcgatgtgctgaagtccggcacccggaaagac
gaactcatcacaccgaaagagcacctgcagaagatgtacgtgctccgccgcatcctctcg
ccgatgggtacgcaggacgcggtcgagttcctgctcgacaagctcaaaggctcgaagaac
aacgacgacttcttccagtcgatgaatacgtga
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