KEGG   Thiobacillus sedimenti: VA613_00520
Entry
VA613_00520       CDS       T10461                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
tsw  Thiobacillus sedimenti
Pathway
tsw03030  DNA replication
tsw03430  Mismatch repair
tsw03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tsw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VA613_00520
   03430 Mismatch repair
    VA613_00520
   03440 Homologous recombination
    VA613_00520
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tsw03032]
    VA613_00520
   03400 DNA repair and recombination proteins [BR:tsw03400]
    VA613_00520
Enzymes [BR:tsw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     VA613_00520
DNA replication proteins [BR:tsw03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     VA613_00520
DNA repair and recombination proteins [BR:tsw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     VA613_00520
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: WRS39382
UniProt: A0ABZ1CJE5
LinkDB
Position
complement(110136..110825)
AA seq 229 aa
MIWRFRPRPALDTTLAARLQEVTARPVREQGLNEDWIVVDVETGGLNPRVDPLLAIGAVR
VTGGAIAVTPACELRLRQHEATTGDNILVHGITTGEQLAGAEPAAALLDWLAFAGGRPRL
AYHAAFDRVALERASMAWLGLKDSAVWLDLALLAPLLLPTGPGFNRPLDDWLAHFGIPVY
QRHGALADAYATAQLWLALLPLAHARGLTQLRQLLRFCRQARWLKSAPV
NT seq 690 nt   +upstreamnt  +downstreamnt
gtgatctggcgtttccgtccccgccccgccctggacacgacactcgcggcgcgcctgcag
gaagtcacggcacgcccggttcgcgagcagggcctgaacgaggactggatcgtggtcgac
gtcgaaaccggcggcctcaatccgcgcgtcgacccgctgctcgccatcggcgcggtcagg
gtgaccggcggcgccatcgccgtgacgcccgcgtgcgagctgcggttgcggcagcacgag
gcgaccaccggcgacaacatcctcgtgcacggcatcaccaccggcgaacagctcgccggc
gccgagcccgccgcagcgctgctcgactggctggcattcgccggcggccgcccacggctc
gcgtaccacgcggcgttcgaccgcgttgcgctggagcgtgcgagcatggcctggctggga
ctgaaggattccgccgtatggctcgacctcgcgctgctcgcgccgctgctgctgcccacc
ggcccgggattcaaccggccgctggacgactggctcgcgcacttcggcatcccggtctac
cagcgccacggtgcgctcgccgacgcctacgccaccgcgcagctatggctggcgctgctg
ccgctggcgcacgcccggggcctgacccagctccggcagctgctgcgtttttgccgtcag
gcccgctggctcaaatccgcccccgtctag

DBGET integrated database retrieval system