Thiobacillus sedimenti: VA613_01385
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Entry
VA613_01385 CDS
T10461
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
tsw Thiobacillus sedimenti
Pathway
tsw00300
Lysine biosynthesis
tsw00470
D-Amino acid metabolism
tsw01100
Metabolic pathways
tsw01110
Biosynthesis of secondary metabolites
tsw01120
Microbial metabolism in diverse environments
tsw01230
Biosynthesis of amino acids
Module
tsw_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
tsw_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tsw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VA613_01385 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VA613_01385 (lysA)
Enzymes [BR:
tsw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
VA613_01385 (lysA)
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Paralog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WRS39548
UniProt:
A0ABZ1CKL3
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Position
complement(298529..299773)
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AA seq
414 aa
AA seq
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MNTLHRIDGRLHLEDVALDTLAERFGTPLYVYSRAALESAYRAYAEAFAATPHLICYAVK
ANSSLAILNLFARLGAGFDIVSGGELARVLAAGGDAGKVVFSGVGKTANEMRAALDAGIL
CFNLESESELHRLDRVAGDMGKVAPVSFRVNPDVDPKTHPYISTGLKENKFGVPIAEAPA
LYRLAASLPNLKVTGVDCHIGSQLTDLSPLADAADRVLDLVDTLAADGIALRHIDLGGGV
GIRYRDETPPDLAAYGRVLAQKFAGRREKLLLEPGRSLVGNAGLLLTRVEYLKPGEDKNF
AIVDAAMNDLMRPALYEAYHEIVAVGERTVPARRYDIVGPICETGDFLGFARDLAIEEGD
LLALLSAGAYGMSMASNYNSRPRAAEILIDKNEIHLVRERETLDQLLAGERLVY
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
ttgaataccctgcatcgcatcgacggccgcctccatctcgaggacgtggcactggatacg
ctcgccgagcgtttcggcaccccgctctacgtgtactcgcgggcagcgctcgaatccgcc
taccgcgcctacgccgaggccttcgccgccacgccgcacctcatctgctacgcggtgaag
gccaattccagcctcgccatcctcaacctcttcgccaggctcggcgccggcttcgacatc
gtgtcgggcggcgagctcgcccgcgtgctggcggccggcggcgatgccggcaaggtcgtg
ttctccggcgtcggcaagaccgcgaacgaaatgcgtgccgccctcgacgccggcatcctg
tgcttcaacctcgagtcggaaagcgagttgcatcgactcgaccgcgtcgccggcgacatg
ggcaaggtcgcgccggtgtcgttccgcgtcaaccccgacgtcgaccccaagacccatccc
tatatctccaccggcctcaaggagaacaagttcggcgtgccgatcgccgaggcgcccgca
ctctaccgcctggccgccagcctgccgaacctcaaggtcaccggcgtcgactgccacatc
ggctcgcagctgaccgatctctcgccgctggcagacgccgccgaccgcgtgctggacctc
gtcgacaccctcgcagcagacggcatcgcgctgcgccacatcgacctcggcggcggcgtc
ggcatccgctatcgcgacgagacgccccccgacctcgccgcctacggccgggtgctggcg
cagaagttcgccggccgccgcgagaaactgctgttggaacctggccgttcgctggtcggc
aacgcaggcctgctgctgactcgcgtcgaatacctgaagcccggcgaggacaagaacttc
gccatcgtcgacgccgcgatgaacgatctgatgcgcccggcgctgtacgaggcctaccac
gagatcgtcgcggtcggcgaaagaaccgtgccagcgcgtcgctacgacatcgtcggcccg
atctgcgaaaccggcgatttccttgggtttgcgcgggatctggcgatcgaggagggcgac
cttctggcactgctttcggccggcgcctatggcatgagcatggcgtcgaactacaattcg
cgtccgcgcgcggccgaaatcctgatcgacaagaatgaaattcatctcgttcgcgagcgc
gaaacgctggaccagctcctcgctggagagcggcttgtatactga
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