KEGG   Thiobacillus sedimenti: VA613_01385
Entry
VA613_01385       CDS       T10461                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
tsw  Thiobacillus sedimenti
Pathway
tsw00300  Lysine biosynthesis
tsw00470  D-Amino acid metabolism
tsw01100  Metabolic pathways
tsw01110  Biosynthesis of secondary metabolites
tsw01120  Microbial metabolism in diverse environments
tsw01230  Biosynthesis of amino acids
Module
tsw_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
tsw_M00526  Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:tsw00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    VA613_01385 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    VA613_01385 (lysA)
Enzymes [BR:tsw01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     VA613_01385 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: WRS39548
UniProt: A0ABZ1CKL3
LinkDB
Position
complement(298529..299773)
AA seq 414 aa
MNTLHRIDGRLHLEDVALDTLAERFGTPLYVYSRAALESAYRAYAEAFAATPHLICYAVK
ANSSLAILNLFARLGAGFDIVSGGELARVLAAGGDAGKVVFSGVGKTANEMRAALDAGIL
CFNLESESELHRLDRVAGDMGKVAPVSFRVNPDVDPKTHPYISTGLKENKFGVPIAEAPA
LYRLAASLPNLKVTGVDCHIGSQLTDLSPLADAADRVLDLVDTLAADGIALRHIDLGGGV
GIRYRDETPPDLAAYGRVLAQKFAGRREKLLLEPGRSLVGNAGLLLTRVEYLKPGEDKNF
AIVDAAMNDLMRPALYEAYHEIVAVGERTVPARRYDIVGPICETGDFLGFARDLAIEEGD
LLALLSAGAYGMSMASNYNSRPRAAEILIDKNEIHLVRERETLDQLLAGERLVY
NT seq 1245 nt   +upstreamnt  +downstreamnt
ttgaataccctgcatcgcatcgacggccgcctccatctcgaggacgtggcactggatacg
ctcgccgagcgtttcggcaccccgctctacgtgtactcgcgggcagcgctcgaatccgcc
taccgcgcctacgccgaggccttcgccgccacgccgcacctcatctgctacgcggtgaag
gccaattccagcctcgccatcctcaacctcttcgccaggctcggcgccggcttcgacatc
gtgtcgggcggcgagctcgcccgcgtgctggcggccggcggcgatgccggcaaggtcgtg
ttctccggcgtcggcaagaccgcgaacgaaatgcgtgccgccctcgacgccggcatcctg
tgcttcaacctcgagtcggaaagcgagttgcatcgactcgaccgcgtcgccggcgacatg
ggcaaggtcgcgccggtgtcgttccgcgtcaaccccgacgtcgaccccaagacccatccc
tatatctccaccggcctcaaggagaacaagttcggcgtgccgatcgccgaggcgcccgca
ctctaccgcctggccgccagcctgccgaacctcaaggtcaccggcgtcgactgccacatc
ggctcgcagctgaccgatctctcgccgctggcagacgccgccgaccgcgtgctggacctc
gtcgacaccctcgcagcagacggcatcgcgctgcgccacatcgacctcggcggcggcgtc
ggcatccgctatcgcgacgagacgccccccgacctcgccgcctacggccgggtgctggcg
cagaagttcgccggccgccgcgagaaactgctgttggaacctggccgttcgctggtcggc
aacgcaggcctgctgctgactcgcgtcgaatacctgaagcccggcgaggacaagaacttc
gccatcgtcgacgccgcgatgaacgatctgatgcgcccggcgctgtacgaggcctaccac
gagatcgtcgcggtcggcgaaagaaccgtgccagcgcgtcgctacgacatcgtcggcccg
atctgcgaaaccggcgatttccttgggtttgcgcgggatctggcgatcgaggagggcgac
cttctggcactgctttcggccggcgcctatggcatgagcatggcgtcgaactacaattcg
cgtccgcgcgcggccgaaatcctgatcgacaagaatgaaattcatctcgttcgcgagcgc
gaaacgctggaccagctcctcgctggagagcggcttgtatactga

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