Thiobacillus sedimenti: VA613_02505
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Entry
VA613_02505 CDS
T10461
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
tsw Thiobacillus sedimenti
Brite
KEGG Orthology (KO) [BR:
tsw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsw02000
]
VA613_02505
Transporters [BR:
tsw02000
]
Other transporters
Pores ion channels [TC:
1
]
VA613_02505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
WRS39759
UniProt:
A0ABZ1CK62
LinkDB
All DBs
Position
515012..517081
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AA seq
689 aa
AA seq
DB search
MRTGNAVNSRSNGTLGTLARALCMGGALACAPLARADVTESEFLDDIPVVLSVSRLSQPV
NEAPAAVTVIDQDMIRASGFRDIPDLLRLVPGFSVAYTRDNTWAAGYHGLGDAYSRRFQV
LVDGRSIYSPHYGSVNWTDLPLSIDDIERIEVVRGPDAALYGANAFAAVINIITKTAAQV
GGEFVSLQYGEQGMRGATVRHGGGDGPLRYRLTASAQQRDRFERDITTKTGAGVGDNGQY
FEASKTYFLNGRWDWQLSADSDAMAQFGVSQGDWKAGKQTLDPRSALEPRTQDSGALYLQ
VAHHKIESARREWRLQAYHAQNRFDANAAADLTSLGFGLVNVDQYLLQTRSNVELQVNEQ
WRSDLRGVWGGELRRETVGSPQNYNSGRTLSGELARVFGNVEWRPHDRLLLQGGTMLEHH
YFTGTDLSPRIAANFTVVPGHVIRLGVSRAYRSPTFFEQDGNQVFVLQSGAIADVVTVPS
DGLKPERVLSREIGYVGHWRAARLEMDARLFMDKIDDFIGQDKYNFVNDGALRPNEFKYA
NIGSARSHGGEIQLRWRPVHAVDVSAHYARVFLDAHFGGAGIHNVINFNKDVPVSAPRNT
WGLLASYSPGLGWQASLGLWRSDAMKWLSEGDITQAYNRMDLRLARRWTWEGREVEAAVV
GQSLLGSYQEFRDTNIFSRRVYGSLSLAW
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaccggcaatgcggtgaacagcagatcaaatgggacactcgggacgctggcgcgc
gccttatgtatgggcggcgccctggcgtgcgccccgttggcgcgtgccgacgtcaccgaa
tccgaatttctcgacgacatccccgtggtgctgtcggtgtcgcggctgtcgcaaccggtc
aacgaagcgccggccgccgtcaccgtcatcgaccaggacatgatccgtgcctcgggtttc
cgggatatccccgacctgcttcgcctggtgcccggtttctcggtcgcttacacgcgcgac
aacacctgggcggccggctatcacgggctcggcgacgcctattcgcgccgcttccaggtc
ctggtcgacggtcgctcgatctacagcccccactacggttcggtgaactggaccgacctg
ccgctttccatcgacgacatcgagcgcatcgaagtcgtgcgcggccccgatgccgccctc
tatggtgcaaacgccttcgccgcggtcatcaacatcatcaccaagacggcagcgcaggtc
gggggcgagttcgtttcgctgcagtacggcgagcaggggatgcgcggcgcgaccgttcgc
cacgggggcggagacggtcccctccgctaccgtctcacggcatcggcgcagcagcgcgac
cgcttcgaacgcgacatcacgaccaagaccggggccggcgtcggggacaacggacagtac
ttcgaggccagcaagacctactttctcaacggccgctgggactggcagctgtccgccgat
tccgatgcgatggcgcaattcggcgtgtcgcagggcgactggaaggccggcaagcagacc
ctggatccgaggagcgccctcgaaccgcgcacgcaggactcgggcgcgctgtatctgcag
gtcgcccatcacaagatcgagtccgcgcgccgcgagtggcgcttgcaggcctaccacgcg
cagaaccgtttcgatgccaatgctgcggcagacctgacgtcgctcggcttcggcctcgtg
aacgtcgaccagtatctgctgcagacgcgcagcaacgtcgaactgcaggtgaacgagcag
tggcggtcggatctgcggggggtatggggcggcgaactgcggcgcgagacggtgggcagc
ccgcagaactacaattccggccggaccttgagcggcgaattggcgcgcgtgttcggcaac
gtcgagtggcgtccgcatgatcggctgctgctgcagggcggcacgatgcttgagcaccac
tatttcacgggcaccgacctttcgccgcgtattgcggccaatttcaccgtggtgccgggg
cacgtcatccggctcggcgtttcgcgcgcctaccgctcgcccacctttttcgagcaggac
ggcaaccaggtctttgtcctgcagtccggcgcgatcgccgacgtcgtgaccgtgccgtcc
gacggcctgaaacccgagcgcgtcctgtcgcgcgagatcggctacgtcggccattggcgt
gcggcccgcctcgaaatggacgcgcggctgttcatggacaagatcgacgacttcatcggg
caggacaaatacaatttcgtcaacgacggcgcgctccgcccgaacgagttcaaatacgcc
aacatcggcagcgcgcgctcgcacggcggcgagatccagctgcggtggcggcccgtgcat
gccgtcgacgtgagcgcgcactatgcgcgggtattcctggacgcgcattttggtggagca
ggcatccacaacgtcatcaacttcaacaaggatgtcccggtgtccgccccccgcaacacc
tgggggctgctcgccagctacagcccgggcctgggctggcaggcgagcctcggcctgtgg
cgcagcgatgccatgaagtggctgtccgagggcgacatcacccaggcctacaaccgcatg
gacctgcgcctggcgcggcgctggacctgggaggggcgcgaggtcgaggcggcggtcgtc
ggacagagcctgctcggcagctatcaggaatttcgcgataccaacatcttcagccgccgc
gtctacggcagcctcagcctggcctggtaa
DBGET
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