Thiobacillus sedimenti: VA613_03210
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Entry
VA613_03210 CDS
T10461
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
tsw Thiobacillus sedimenti
Pathway
tsw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tsw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VA613_03210
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tsw01007
]
VA613_03210
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsw03016
]
VA613_03210
Enzymes [BR:
tsw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
VA613_03210
Amino acid related enzymes [BR:
tsw01007
]
Aminoacyl-tRNA synthetase
Class I (U)
VA613_03210
Transfer RNA biogenesis [BR:
tsw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
VA613_03210
Prokaryotic type
VA613_03210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1_2
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
WRS39890
UniProt:
A0ABZ1CLD5
LinkDB
All DBs
Position
complement(659608..662370)
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AA seq
920 aa
AA seq
DB search
MELAKSFEPAEIEKRWYAQWESAGYFRAGDAPDARSYCIMLPPPNVTGTLHMGHAFQHTL
MDALTRYHRMMGDNTLWQPGTDHAGIATQIVVERQLDAQGVSRHDLGREKFLEKVWEWKE
HSGSTITRQMRRLGTSPDWSRERFTMDEGLSRAVTEVFVRLYREGLIYRGKRLVNWDPVL
GTAVSDLEVVSSEEDGFIWEINYPLEDGSGHLTVATTRPETLLGDTAVAVHPDDERYKHL
IGTHVRLPIAERSIPVIADDYVDRDFGTGVVKITPAHDFNDWQVGQRHKLVAINVLTLDA
KMNDLCPTEYQGLDRYDARQKLLDELQARGLLVSAKPHKLMIPRGDRTHAVIEPMLTDQW
FMSMEDLAKRALGVVDSGELKFVPENWTTTYRQWLENIQDWCVSRQLWWGHRIPAWYDAD
GNFYVAHTAEEARKQAGGRELTQDNDVLDTWFSSALWPFSTLGWPDATPELERYLPTSVL
VTGFDIIFFWVARMVMMSLHFTGKVPFREVYVTGLVRDSEGQKMSKSKGNVLDPIDLIDG
IAVDDLVAKRTQGLMNPKQAAGIEKRTRKEFPEGIAAYGTDALRFTFASLATHGRDIKFD
LQRAEGYRNFCNKLWNATRFALMNLEGHDCGQDAPPSPASGEEGGFEYSDADRWIATRLQ
QAVADVHDAFAAYRFDQAARAVYEFVWDEYCDWYLELAKVQLNNGTPEQQRATRRTLATV
LEATLRLAHPVIPFITEELWQKVAPLAGVAGESLMLASYPQVDDSRRHPDSAARIQLLKE
LVNACRTLRGEMNLSPAQRVPLVVEGDAGVVGALAPYISALAKLSEVSAVATLADADAPV
ALVGDMRLMLVVEIDKEAERARLAKEIARIQGEIRKAEGKLANPSFVDKAPAAVVEQEKG
RLADFGAMLDKLQAQHARLG
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggaactcgccaaatccttcgaaccggccgaaatcgaaaagcgctggtacgcgcagtgg
gaaagcgccggctacttcagagcgggcgatgcgcccgacgcccgttcgtactgcatcatg
ctgccgccgcccaacgtcaccggcacgctgcacatggggcacgccttccagcacacgctg
atggacgcgctgacgcgctaccaccgcatgatgggcgacaacacgctatggcagccaggc
accgaccatgccggcatcgccacgcagatcgtggtggagcgccagctcgacgcgcaaggc
gtctcgcgccacgatctcggccgcgagaagttcctcgaaaaggtgtgggaatggaaggaa
cactccggctcgaccatcacccgccagatgcggcggctgggcaccagccccgactggagc
cgcgagcgcttcaccatggacgaaggcctgtccagggccgtcaccgaggtcttcgtgcgt
ctgtatcgcgagggcctgatctaccgcggcaagcggttggtgaactgggacccggtcctc
ggcaccgcagtctctgacctcgaggtcgtcagttccgaggaagacggcttcatctgggaa
atcaactacccgctcgaggatggcagcgggcacctcaccgtcgccaccacccggcccgaa
accctgctcggcgacaccgccgttgccgtccaccccgacgacgagcgctacaagcacctg
atcggcacgcacgtgcgcctgccgattgccgagcgcagcatcccggtgatcgccgacgac
tacgtcgaccgcgactttggcaccggcgtcgtcaagatcacccccgcgcacgacttcaac
gactggcaggtcggccagcgccacaagctggtggcgatcaacgtgctgacgctcgacgcg
aagatgaacgacctctgccccaccgaataccagggcctcgaccgctacgacgcgcgccag
aagctgctcgacgaactgcaggccagaggtctgctggtttcggccaagccgcacaagctg
atgatcccgcgcggcgaccgcacccacgccgtgatcgagccgatgctcaccgaccagtgg
ttcatgagcatggaagacctggcgaagcgggcgctcggcgtggtcgattcgggcgagctg
aaattcgtccccgagaactggaccacgacctaccgccagtggctggaaaacatccaggac
tggtgcgtatcgcggcagctgtggtggggccatcgcatccccgcctggtacgacgcagac
ggcaacttctacgtcgcccacaccgcggaggaagcgagaaaacaggccggcggccgcgaa
ctgacgcaggacaacgacgtcctcgacacctggttctcgtccgcgctgtggcccttctcg
acgctgggctggccggatgcgacgcccgagctcgaacgctatctgccgacctcggtgctc
gtgactggcttcgacatcatcttcttctgggtcgcccgcatggtgatgatgtcgctgcac
ttcaccggcaaggtgccgttccgcgaggtctacgtgacggggctggtgcgcgactccgaa
ggccagaagatgagcaagtcgaagggcaacgtgctcgacccgatcgatctcatcgacggc
attgccgtagacgatctggtcgccaagcgcacccagggcctgatgaaccccaagcaggcc
gccggcatcgagaagcgcacccgcaaggaattccccgagggcatcgcggcctacggcacc
gatgcgctgcgcttcactttcgcgagcttggccacccacggccgcgacatcaagttcgac
ctgcagcgcgccgagggctaccgcaacttctgcaacaaactgtggaacgccacccgcttc
gcgctgatgaacctcgaaggccacgactgcgggcaagacgcgcccccctcccccgcaagc
ggggaagagggagggtttgaatactcggacgccgatcgctggatcgccacgcgcctgcag
caggccgttgccgacgtccacgacgccttcgccgcctaccgcttcgaccaggcggcccgc
gccgtctacgaattcgtctgggacgagtactgcgactggtacctcgagctcgccaaggtc
cagctcaacaacgggacgccggagcagcagcgtgcgacccgccgcacacttgccacggtg
ctcgaagccacgctgcggctggcgcatcccgtcatcccgttcatcaccgaggagctgtgg
cagaaggtcgcgccgctcgccggcgtggcgggcgaaagcctcatgctcgcgtcctatccg
caggtcgatgactcgcggcgccatcccgacagcgccgcgcggatccaactgctgaaggaa
ctggtcaacgcctgccgcacgctgcgcggcgagatgaacctgtcgcccgcgcagcgggtg
ccgcttgtcgtcgagggcgatgcgggcgtggtgggtgccctcgccccctacatcagcgcg
ctcgccaagctctccgaggtgagcgccgtcgcgacgctcgccgacgccgacgctccggtc
gcactggtcggcgacatgcggctgatgctcgtggtggaaatcgacaaggaagccgaacgt
gcgcggctcgccaaggaaatcgcccgcatccagggcgagatcagaaaggccgaaggcaag
ctcgccaatcccagcttcgtcgataaggcccctgccgccgtcgttgaacaggaaaaaggc
cgactcgccgacttcggcgccatgctcgacaagctgcaggcgcagcacgcacggctgggc
tga
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