KEGG   Thiobacillus sedimenti: VA613_03320
Entry
VA613_03320       CDS       T10461                                 
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
  KO
K03977  GTPase
Organism
tsw  Thiobacillus sedimenti
Brite
KEGG Orthology (KO) [BR:tsw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tsw03009]
    VA613_03320 (der)
Ribosome biogenesis [BR:tsw03009]
 Prokaryotic type
  GTPases
   VA613_03320 (der)
SSDB
Motif
Pfam: MMR_HSR1 FeoB_N KH_dom-like GTP_EFTU AIG1 Dynamin_N RsgA_GTPase Roc ABC_tran Ras TniB AAA_22 ATP_bind_1 AAA_29 cobW SRPRB AAA AAA_18 AAA_24 AAA_14 MMR_HSR1_Xtn
Other DBs
NCBI-ProteinID: WRS39911
LinkDB
Position
680717..682126
AA seq 469 aa
MLPTLVLVGRPNVGKSTLFNRLTGTRDALVHDMPGMTRDRHYGRGRIGGKPYLVVDTGGL
EPVAKDGIMAEMARQTLQAIDEADAIIFMVDGRAGLTPQDKVIADRLRRAHCPVFLAVNK
AEGMNRAVVTAEFHELALGEPLAISGAHGDGIGDLVAEALAPFPAEEAEPDEHGVPKIAL
VGRPNVGKSTLVNALVGEERVIAFDQPGTTRDSIYVEFERDGKPYILIDTAGVRRKGKVF
ETVEKFSVIKTLQAIEDANVVVLVLDARENVSDQDAHLAGFVLETGRALVVAVNKWDGLS
PEQRDDIKRDIGRKLAFLDFARFNYISALKGKGLDALLKDVEAAHAAAFIKMSTPKLTRV
LEAAVEQHAPPKNGLFRPKPRYAHQGGKNPPVIVLHGNALEGLRDDYKRYLESSFRKAFK
LQGTPLRIQVKEDEGKNPFEGKKRGPLSASDETRRRREKRIRRKVYGST
NT seq 1410 nt   +upstreamnt  +downstreamnt
atgctcccgaccctggttcttgtcggacgtcccaacgtcggcaagtccacgctcttcaac
cggctgaccggcacgcgcgacgcgctggtgcacgacatgcccggcatgacgcgcgaccgc
cactacgggcgcggccgcatcggcggcaagccgtacctcgtggtcgacaccggcgggctc
gagcccgtcgccaaggacggcatcatggccgagatggcgcgccagacgctgcaggcgatc
gacgaggccgacgcgatcatcttcatggtcgacggccgcgccggcctcacgccgcaggac
aaggtcatcgccgaccgcctgcggcgcgcgcactgtccggtgttcctcgcggtgaacaag
gcggagggcatgaaccgcgccgtcgtcaccgccgaattccacgagcttgccctcggcgaa
ccgctcgcgatctccggggcgcacggcgacggcatcggcgatctcgtcgccgaggcgctg
gcaccgtttcccgccgaggaagccgagcccgacgagcatggcgtcccgaagatcgcgctg
gtggggcgccccaacgtcggcaagtcgacgctggtcaacgcgctggtcggcgaggagcgc
gtgatcgccttcgaccagcccggcacgacgcgcgactcgatctacgtcgagttcgagcgc
gacggcaagccctacatcctcatcgacactgccggcgtgcgccgcaagggcaaggtgttc
gagaccgtcgagaagttctccgtcatcaagacgctgcaggcgatcgaggacgccaacgtc
gtggtgctggtgctcgacgcgcgcgagaacgtctccgaccaggatgcgcacctcgccggc
ttcgtgctcgagaccgggcgcgcgctggtggtcgcggtcaacaagtgggatgggctctcg
ccggagcaacgcgacgacatcaagcgcgacatcggccgcaagttggcgtttctcgacttc
gcccgcttcaactacatctcggcgctcaagggcaagggcctcgacgcgctgctgaaggat
gtcgaggcggcgcacgccgccgccttcatcaagatgtcgacgcccaagctgacgcgggtg
ctggaggcggcggtcgagcagcatgcgccgccgaagaacggcctgttccggccgaagccg
cgctacgcgcaccagggcggcaagaacccgccggtgatcgtgctgcatggcaacgcgctg
gaaggcctgcgcgacgattacaagcgctatctggagtcgagtttccgcaaggcgttcaag
ctgcagggcacgccgctgcggatccaggtcaaggaagacgagggcaagaacccgttcgag
ggcaagaagcgcggcccgctctcggcgagcgatgagacgcggcggcggcgcgagaagcgg
atccggcgcaaggtctacggctcgacctga

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