Thiobacillus sedimenti: VA613_04300
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Entry
VA613_04300 CDS
T10461
Name
(GenBank) peptidoglycan DD-metalloendopeptidase family protein
KO
K06194
lipoprotein NlpD
Organism
tsw Thiobacillus sedimenti
Brite
KEGG Orthology (KO) [BR:
tsw00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
VA613_04300
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M23
LysM
Biotin_lipoyl_2
Biotin_lipoyl
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
WRS40097
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Position
880895..881821
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AA seq
308 aa
AA seq
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MRAAALVAVVLALAGCASNGMAPVDDRAPAHAATARPATPQIAPSTNGLHTVQRGDTLYA
IAFANGLDYREVAIWNRLESADRILVGQVLRLTPPDDGVEIKPLDDEPAPSARPLVEAPL
VREPQAQVLPYSEANWARVSSVPSTTIAATPAAKPAAAAPAAPAPAPAATAATEPAAKSA
PAANGLVDAWLWPADGTVIGRFGAAGGKGIDIAGARNTPVRAVAPGKVVYSGSGLRGYGR
LLIIKHAGEFLSAYAHNEAILVKEGDTVTAGQKIALMGDSDASRVELHFEIRRYGKPLDP
LTYLPERS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgccgccgcgctggtggcggtcgttctggcgctggccgggtgcgcgtcgaacggg
atggcccctgtcgacgaccgcgcgccggcgcatgccgcgacggcgcggcccgccacgccg
cagatcgcgccctcgaccaacggcctgcacaccgtccagcgcggcgacacgctgtatgcg
atcgccttcgccaacggccttgattaccgcgaggtcgccatctggaaccgtctcgaatcc
gccgatcgcatcctggtcggccaggtgctgcggctgacgccgccggacgatggcgtcgag
atcaagccgctcgacgacgagccggcgccgagcgcccgtccgctcgtcgaggcgccgctc
gttcgcgagccgcaggcgcaggtgctgccctattccgaggcgaactgggcgcgggtgtcg
agcgtgccgtcaacgacaatcgccgccacgcctgccgcgaagcctgctgcggcggcaccc
gctgcgcccgcgcccgcgccagccgcgacggcggcgaccgaaccggcggcgaaatcggcg
ccggccgccaacggcctggtcgacgcctggctgtggccggccgacggcacggtgatcggc
cgcttcggcgcggcgggcggcaagggcatcgacatcgccggtgcgcgcaacacgccggtg
cgggcggtggcacccggcaaggtggtctacagcggcagcggcctgcgcggctacgggcgt
ctgctcatcatcaagcacgcaggcgagtttctctcggcctacgcgcacaacgaggccatc
ctggtgaaggaaggcgacacggtgacggccggccagaagatcgccctgatgggcgacagc
gacgccagccgtgtcgaactgcatttcgagatccgccgttacggaaagccgcttgatccc
ctcacttacctgccggagcgttcatga
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