Thiobacillus sedimenti: VA613_04380
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Entry
VA613_04380 CDS
T10461
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
tsw Thiobacillus sedimenti
Brite
KEGG Orthology (KO) [BR:
tsw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsw03009
]
VA613_04380
Enzymes [BR:
tsw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
VA613_04380
Ribosome biogenesis [BR:
tsw03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VA613_04380
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
WRS40112
UniProt:
A0ABZ1CL60
LinkDB
All DBs
Position
complement(896477..897019)
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AA seq
180 aa
AA seq
DB search
MARLIVFNKPYGVLSQFTPEGRWQGLRDHLDIPGVYAAGRLDADSEGLLILTDDGALQAR
IADPRHKLPKTYWAQVEGSPTDADLEPLRRGVDLGDFVTRPAQARLIDEPADLWPRTPPI
RFRASIPTAWIELVIAEGKNRQVRRMTAKIGFPTLRLVRAAVGDWRLGGLKPGEWKEIHV
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcgattgatcgtgttcaacaaaccctatggcgtgctgagccagttcaccccggag
gggcgctggcagggcctgcgcgaccacctcgacattccgggcgtgtacgcggccggccgg
ctcgatgccgacagcgagggactgctgattttaaccgatgacggcgccctgcaggcccgc
atcgccgacccccggcacaagctgcccaagacctactgggcgcaggtcgaaggctcaccc
accgacgccgacctcgagcccttgcgccgcggcgtcgatctcggcgacttcgtcacccgg
ccggcgcaggcgcgcctgatcgacgagcccgccgatctttggccgcgcaccccgccgatc
cgctttcgcgccagcatccccaccgcatggatcgagctcgtgatcgccgagggcaagaac
cgccaggtgcgacgcatgacggcgaagatcggctttccgacgctgcgcctcgtgcgcgcc
gccgtcggcgactggagactgggcggcctcaagcccggagaatggaaagaaattcatgtc
tga
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