Thiobacillus sedimenti: VA613_04385
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Entry
VA613_04385 CDS
T10461
Symbol
icd
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
tsw Thiobacillus sedimenti
Pathway
tsw00020
Citrate cycle (TCA cycle)
tsw00480
Glutathione metabolism
tsw00720
Other carbon fixation pathways
tsw01100
Metabolic pathways
tsw01110
Biosynthesis of secondary metabolites
tsw01120
Microbial metabolism in diverse environments
tsw01200
Carbon metabolism
tsw01210
2-Oxocarboxylic acid metabolism
tsw01230
Biosynthesis of amino acids
tsw04146
Peroxisome
Module
tsw_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
tsw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
VA613_04385 (icd)
09102 Energy metabolism
00720 Other carbon fixation pathways
VA613_04385 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
VA613_04385 (icd)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
VA613_04385 (icd)
Enzymes [BR:
tsw01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
VA613_04385 (icd)
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GFIT
Motif
Pfam:
Iso_dh
MJ1316
Phage_SSB
Motif
Other DBs
NCBI-ProteinID:
WRS40113
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Position
897089..898330
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AA seq
413 aa
AA seq
DB search
MTYQHIQIPAQGKKITVNADNTLNVPDTPIIPFIEGDGTGVDITPAMKKVVDAAVAKAYG
GKKRIAWMEVYAGEKAVKVYGGDQWLPDETVKAVRDYVISIKGPLTTPTSGGIRSLNVAL
RQLLDLYVCLRPVRYFTGVPSPVKEPEKVDMVIFRENTEDIYAGVEWEANSDEAKRVIKY
LQRQMGVKKIRFPGTSAIGIKPVSIEGSERLIRKAIQYAIDNKRKSVTLVHKGNIMKFTE
GGFKKWGYELAAREFGAKVIGEGPWMQLPNGIVIKDVIADAFLQQILLRPAEYDVIATLN
LNGDYISDALAAEVGGIGIAPGANLSDTVAMFEATHGTAPKYAGKDYVNPGSLILSAEMM
LRHLGWTEAADLIIASMERTIQAKTVTYDFARLMDGATEVKCSAFAEAMVAKM
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgacctaccagcacatccagatccccgcacagggcaagaagatcaccgtcaacgccgac
aacacgctgaacgtgcccgacaccccgatcattcccttcatcgagggcgacggcaccggc
gtcgacatcaccccggcgatgaagaaggtcgtcgatgccgcggtcgccaaggcctacggc
ggcaagaagaggatcgcgtggatggaggtctacgccggcgagaaggcggtcaaggtctac
ggcggcgaccagtggctgcccgacgagaccgtgaaggcggtgagggattacgtgatctcg
atcaagggcccgctgaccacgccgacctcgggcggcatccgctcgctcaacgtcgcgctg
cgccagctgctcgacctgtacgtgtgcctgcgcccggtacgctacttcaccggcgtgcct
tcccccgtgaaggagcccgagaaggtcgacatggtgatcttccgcgagaacaccgaggac
atctacgccggcgtcgagtgggaggccaactccgacgaagcgaagcgcgtcatcaagtac
ctgcagcggcagatgggcgtgaagaagatccgcttccccgggacctcggccatcggcatc
aagccggtgtcgatcgagggttccgaacgtctgatccgcaaggccatccagtacgcgatc
gacaacaagcgcaagtcggtgaccctggtgcacaagggcaacatcatgaagttcaccgag
ggcggcttcaagaagtggggctacgagctcgccgcgcgcgaattcggcgccaaagtgatt
ggcgaaggcccgtggatgcaactcccgaacggcatcgtcatcaaggacgtcatcgccgac
gccttcctgcagcagatcctgctgcgcccggccgaatacgacgtgatcgccacgctcaac
ctcaacggcgactacatctccgacgcgctcgcggcggaagtcggcggcatcggcatcgcg
ccgggggcgaacctctccgacaccgtcgcgatgttcgaggcgacccacggcacggcgccg
aagtatgccggcaaggactacgtgaacccgggctcgctgatcctgtcggccgagatgatg
ctgcgccacctcggctggaccgaggcggcggacctgatcatcgccagcatggaacggacg
atccaggccaagaccgtgacctacgacttcgcccgcctgatggacggcgcgaccgaggtg
aagtgctcggccttcgccgaggcgatggtcgcgaagatgtaa
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