Thiobacillus sedimenti: VA613_04565
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Entry
VA613_04565 CDS
T10461
Name
(GenBank) farnesyl diphosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
tsw Thiobacillus sedimenti
Pathway
tsw00900
Terpenoid backbone biosynthesis
tsw01100
Metabolic pathways
tsw01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
tsw00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
VA613_04565
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tsw01006
]
VA613_04565
Enzymes [BR:
tsw01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
VA613_04565
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
VA613_04565
Prenyltransferases [BR:
tsw01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
VA613_04565
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
WRS40146
LinkDB
All DBs
Position
complement(936431..937324)
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AA seq
297 aa
AA seq
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MATTDFAAWVQACQARIESVLADALPSSHVAPQRLHDAMRYAVLGGGKRVRPLLAFAAGE
VTAADPARVEHAAAAVELIHAYSLVHDDMPAMDDDALRRGKPTVHVEFDEATALLVGDAL
QSLAFDLLASHTLADDAVTQLKMVQLLAQAAGSRGMAGGQAIDLASVGKPLDLTELEFMH
IHKTGALIRAAVLLGAQCGRASEHALGALDHYAKCIGLAFQVVDDVLDAEASTATLGKTA
GKDAAHNKPTYVSLLGAARARELAQELRADAHAALDTLGAPAVRLRQLADFVVERTF
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgactgactttgccgcctgggtccaggcatgccaggcccgcatcgaaagcgtg
ctggccgacgcgcttccctcatcccacgtcgcgccgcagcgtctccacgacgcgatgcgc
tatgccgtgctgggcggcggcaagcgcgtgcggccgctgctggcctttgcggccggcgaa
gtgaccgctgccgatcccgcgcgcgtcgagcacgccgcagcggcggtcgaactgatccac
gcctactctctggtgcacgacgacatgccggcgatggacgacgacgcgctgcggcgtggc
aagccgaccgtgcacgtcgagttcgacgaagcgaccgcgctgcttgtcggcgacgcgctg
cagagcctggcgttcgaccttctcgcgtcgcacacgctcgccgacgacgcagtgacgcag
ctgaagatggtgcagctgctcgcgcaggccgcgggttcgcgcggcatggccggcggccag
gcgatcgacctcgcgagcgtcggcaagccgctcgatctgaccgagctcgaattcatgcac
atccacaagaccggcgcgctgatccgcgccgcggtcctgctcggcgcccagtgcggcagg
gcttcggaacacgcgctcggcgcactcgaccactatgcgaagtgcatcggcctcgccttc
caggtcgtcgacgacgtgctcgatgccgaggcctccaccgccacgctcggcaagaccgcc
ggcaaggacgccgcccacaacaagccgacctacgtcagcctgctcggtgccgcgcgtgca
cgcgaactggcgcaggagctgcgcgccgacgcgcacgccgcgctcgatacgctgggcgcc
cccgccgtgcggctgcgccagctggctgacttcgtcgttgagcggaccttctga
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