KEGG   Thiobacillus sedimenti: VA613_04565
Entry
VA613_04565       CDS       T10461                                 
Name
(GenBank) farnesyl diphosphate synthase
  KO
K00795  farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
Organism
tsw  Thiobacillus sedimenti
Pathway
tsw00900  Terpenoid backbone biosynthesis
tsw01100  Metabolic pathways
tsw01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:tsw00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    VA613_04565
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:tsw01006]
    VA613_04565
Enzymes [BR:tsw01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     VA613_04565
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     VA613_04565
Prenyltransferases [BR:tsw01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   VA613_04565
SSDB
Motif
Pfam: polyprenyl_synt
Other DBs
NCBI-ProteinID: WRS40146
LinkDB
Position
complement(936431..937324)
AA seq 297 aa
MATTDFAAWVQACQARIESVLADALPSSHVAPQRLHDAMRYAVLGGGKRVRPLLAFAAGE
VTAADPARVEHAAAAVELIHAYSLVHDDMPAMDDDALRRGKPTVHVEFDEATALLVGDAL
QSLAFDLLASHTLADDAVTQLKMVQLLAQAAGSRGMAGGQAIDLASVGKPLDLTELEFMH
IHKTGALIRAAVLLGAQCGRASEHALGALDHYAKCIGLAFQVVDDVLDAEASTATLGKTA
GKDAAHNKPTYVSLLGAARARELAQELRADAHAALDTLGAPAVRLRQLADFVVERTF
NT seq 894 nt   +upstreamnt  +downstreamnt
atggcgacgactgactttgccgcctgggtccaggcatgccaggcccgcatcgaaagcgtg
ctggccgacgcgcttccctcatcccacgtcgcgccgcagcgtctccacgacgcgatgcgc
tatgccgtgctgggcggcggcaagcgcgtgcggccgctgctggcctttgcggccggcgaa
gtgaccgctgccgatcccgcgcgcgtcgagcacgccgcagcggcggtcgaactgatccac
gcctactctctggtgcacgacgacatgccggcgatggacgacgacgcgctgcggcgtggc
aagccgaccgtgcacgtcgagttcgacgaagcgaccgcgctgcttgtcggcgacgcgctg
cagagcctggcgttcgaccttctcgcgtcgcacacgctcgccgacgacgcagtgacgcag
ctgaagatggtgcagctgctcgcgcaggccgcgggttcgcgcggcatggccggcggccag
gcgatcgacctcgcgagcgtcggcaagccgctcgatctgaccgagctcgaattcatgcac
atccacaagaccggcgcgctgatccgcgccgcggtcctgctcggcgcccagtgcggcagg
gcttcggaacacgcgctcggcgcactcgaccactatgcgaagtgcatcggcctcgccttc
caggtcgtcgacgacgtgctcgatgccgaggcctccaccgccacgctcggcaagaccgcc
ggcaaggacgccgcccacaacaagccgacctacgtcagcctgctcggtgccgcgcgtgca
cgcgaactggcgcaggagctgcgcgccgacgcgcacgccgcgctcgatacgctgggcgcc
cccgccgtgcggctgcgccagctggctgacttcgtcgttgagcggaccttctga

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