Thiobacillus sedimenti: VA613_04845
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Entry
VA613_04845 CDS
T10461
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
tsw Thiobacillus sedimenti
Pathway
tsw03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
tsw00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
VA613_04845 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
tsw03011
]
VA613_04845 (rpsA)
Ribosome [BR:
tsw03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
VA613_04845 (rpsA)
Bacteria
VA613_04845 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
OB_RRP5_4th
TOBE
Motif
Other DBs
NCBI-ProteinID:
WRS40197
UniProt:
A0ABZ1CPF4
LinkDB
All DBs
Position
995284..997002
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AA seq
572 aa
AA seq
DB search
MSTATASSTPSAMESFAALFEESLSHQEMRQGEVITAEIVAVDNNFVTVNAGLKSESLIP
LEEFKNDQGEIEAKIGDFVSVAIESIEDGFGATKLSRERAKKLAAWLDLEAAMNEGRVVK
GMVQGKVKGGLTVLVGGLRAFLPGSLVDMRPVKDTTPYEYKEMEFKVIKLDRKRNNVVVS
RRAVLEETMGADREALMESLKEGSIVKGVVKNITDYGAFVDLGGIDGLLHITDMAWRRVK
HPSEVVHVGQELEAKILRYDTEKNRVSLGIKQLGDDPWVGIARRYPQGTRMFGKVANLTD
YGAFVEIEEGIEGLVHVSEMDWTNKNVSPSKIVQLGDEVEVMVLDIDEDKRRISLGMKQC
KSNPWEDFSMNHKKGDKVSGAIKSITDFGVFIGLPGGIDGLVHLSDLSWSVPGEEAVRNF
RKGQDVEAVVLGIDLERERISLGIKQLEGDPLSSYASGHEKGSIVKGTIKTIEAKGATVQ
LDGDMEGYLRASEVSRDRVEDMRSHFKEGDEIEAMIINVDRKNRVINLSIKAKDMNEQDA
AMKKLAAESAASSGSTNLGALLKAKLDNKNAE
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgtctactgctaccgcttcctccaccccctctgccatggaaagctttgccgccctgttc
gaggagtccctgtcgcatcaggaaatgcgccagggcgaagtcatcaccgccgagattgtc
gccgtcgacaacaacttcgtgacggtgaacgccggcctcaagtccgagagcctcatcccc
ctcgaggaattcaagaacgaccagggtgagatcgaagccaagatcggcgatttcgtttcc
gtcgccatcgagtcgatcgaagacggcttcggcgcgaccaagctgtcgcgcgagcgcgcc
aagaagctggccgcgtggctggatctggaagcggccatgaacgaaggccgtgtcgtcaag
ggcatggtgcagggcaaggtcaagggcggcctgacggtgctggtgggcgggctgcgcgcc
ttcctgccgggctcgctggtcgacatgcgcccggtcaaggacaccaccccctacgaatac
aaggaaatggagttcaaggtcatcaagctcgaccgcaagcgcaacaacgtcgtcgtgtcg
cgccgtgccgtgctggaagagaccatgggcgccgaccgcgaagcgctgatggaaagcctg
aaggaaggctccatcgtcaagggcgtggtcaagaacatcaccgactacggcgcgttcgtc
gacctcggcggcatcgacggcctgctgcacatcaccgacatggcctggcgccgcgtcaag
catccttccgaagtggtgcacgtcggccaggaactcgaagccaagatcctgcgctacgac
accgagaagaaccgcgtttcgctcggcatcaagcagctgggtgacgatccgtgggtcggc
atcgcccgccgctacccgcagggcacccgcatgttcggcaaggtcgccaacctcaccgac
tacggcgcgttcgtcgagatcgaggaaggcatcgaaggcctggtgcacgtgtccgaaatg
gactggaccaacaagaacgtcagcccctccaagatcgtccagctgggcgacgaggtcgaa
gtcatggtgctcgacatcgacgaggacaagcgccgcatctcgctgggcatgaagcagtgc
aagtcgaacccgtgggaagacttctcgatgaaccacaagaagggcgacaaggtcagcggc
gcgatcaagtcgatcaccgatttcggcgtgtttatcggcctgccgggcggcatcgacggc
ctcgtccacctgtccgacctgtcgtggagcgtgccgggcgaagaggccgtgcgcaacttc
cgcaagggccaggacgtggaagccgtggtgctcggcatcgacctcgagcgcgagcgcatc
tcgctcggcatcaagcagcttgaaggcgatccgctttccagctacgcgtcgggccacgag
aagggcagcatcgtcaagggcaccatcaagaccatcgaagccaagggcgccaccgtccag
ctcgacggcgacatggaaggctacctgcgtgcctccgaagtctcgcgcgaccgcgtcgag
gacatgcgcagccacttcaaggaaggcgacgagatcgaagccatgatcatcaacgtcgac
cgcaagaaccgcgtcatcaacctctcgatcaaggccaaggacatgaacgagcaggatgcg
gcgatgaagaagctggccgccgagtcggccgcttccagcggctcgaccaacctcggtgcg
ctgctgaaggccaagctcgacaacaagaacgccgagtaa
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