KEGG   Thiobacillus sedimenti: VA613_04890
Entry
VA613_04890       CDS       T10461                                 
Symbol
radA
Name
(GenBank) DNA repair protein RadA
  KO
K04485  DNA repair protein RadA/Sms
Organism
tsw  Thiobacillus sedimenti
Brite
KEGG Orthology (KO) [BR:tsw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tsw03400]
    VA613_04890 (radA)
DNA repair and recombination proteins [BR:tsw03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     VA613_04890 (radA)
SSDB
Motif
Pfam: AAA_25 ATPase Zn_ribbon_LapB ChlI Lon_C DUF7125 AAA_22 DnaB_C AAA_16 GvpD_P-loop AAA_24 AAA_14 AAA DUF7129 ABC_tran nSTAND3 AAA_29 AAA_5 nSTAND_NTPase5 SLFN-g3_helicase Zn_ribbon_8 ZnF_RZ-type
Other DBs
NCBI-ProteinID: WRS40206
UniProt: A0ABZ1CLR5
LinkDB
Position
1003809..1005164
AA seq 451 aa
MAKAKTIYTCTECGGQSPKWQGQCPACGAWNTLVETVAESARPRFAALAATSQVQLLHDV
EASEESRIATDIGELDRVLGGGLVPGGVTLIGGDPGIGKSTLLLQALAGLSGRLKTLYVS
GEESARQVALRARRLSLPETNLPVLPEIRLEAILAQLESMKPAVAVIDSIQTLYSEALTS
APGSVAQVRECAAQLTRHAKQSGCAIILVGHVTKEGAIAGPRVLEHIVDTVLYFEGDTGS
SFRLVRAFKNRFGAVNEIGVFAMTEKGLKGVSNPSAIFLSRHGEPVPGSCVLVTQEGTRP
LLVEIQALVDSSHAPSPRRLSVGLEQNRLAMLLAVLHRHAGIACFDQDVFVNAVGGVKIS
EPAADLAVLAAIVSSLRSQPLPDKLVMFGEVGLAGEIRPVQRGQERLKEAAKLGFTQAIV
PAANQPKQKIAGMTVHAVHRLDEAIRLFREG
NT seq 1356 nt   +upstreamnt  +downstreamnt
gtggccaaagccaagacgatctacacttgcaccgagtgcggcgggcagtcgcccaagtgg
caggggcagtgcccggcctgcggcgcctggaacacgctggtcgaaacggtcgctgaatcc
gccaggccacgcttcgccgcgctcgctgcgacgagccaggtccagctgctgcatgacgtc
gaggcctccgaggaaagccgcatcgcgaccgacatcggcgaactcgaccgcgtgctcggc
ggcggcctggtgccaggcggcgtcacgctgatcggcggcgaccccggcatcggcaagtcc
acgcttcttttgcaggcgctcgccggattgtcggggcgactgaagacgctctacgtcagc
ggcgaggaatcggcgcgccaggtcgcgctgcgcgcgcggcgcctttcgctgcccgagacg
aatctcccggtgctgccggaaatccggctcgaggccatcctcgcgcagctcgaatcgatg
aagcccgcggtcgccgtgatcgactcgatccagaccctgtattccgaggcgctgacctcg
gcgcccggctcggtcgcgcaggtgcgcgaatgcgcggcgcagctcacgcgccatgccaag
cagagcggctgcgcgatcatcctcgtcggccatgtcaccaaggaaggcgcgatcgccggg
ccgcgcgtgctcgagcacatcgtcgacaccgtactgtatttcgaaggcgacaccggctcc
tcgttcaggctggtgcgcgcgttcaagaaccgcttcggcgcggtcaacgagatcggcgtg
ttcgcgatgaccgagaagggcctcaagggcgtgtccaatccatcggccatctttctctcg
cgccacggcgagccggtgccgggttcgtgcgtgctggtgacgcaggaaggcacgcggccg
ctgctggtcgagatccaggcgctggtcgattccagccatgcgccgagcccgcgccgcctc
tcggtgggcctggagcagaaccggctcgccatgctgcttgccgtgctgcaccgccacgcc
ggcatcgcctgcttcgaccaggacgtgttcgtgaatgcggtcggcggggtgaagatcagc
gaaccggccgccgacctcgccgtgctggcggcgatcgtctcgtcgctccggagccagccc
ttgcccgacaagctcgtgatgttcggcgaggtcggcctggccggcgagatccgcccggtg
cagcgcggccaggagcgcctcaaggaagcggccaagctcggcttcacgcaggccatcgtg
ccggccgccaaccagccgaagcagaagatcgccggcatgacggtgcacgcagtgcatcgc
ctcgacgaggcgattcgcctgttccgggaaggctga

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