Thiobacillus sedimenti: VA613_05370
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Entry
VA613_05370 CDS
T10461
Symbol
dcm
Name
(GenBank) DNA (cytosine-5-)-methyltransferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
tsw Thiobacillus sedimenti
Pathway
tsw00270
Cysteine and methionine metabolism
tsw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tsw00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
VA613_05370 (dcm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsw03000
]
VA613_05370 (dcm)
03032 DNA replication proteins [BR:
tsw03032
]
VA613_05370 (dcm)
03036 Chromosome and associated proteins [BR:
tsw03036
]
VA613_05370 (dcm)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
tsw02048
]
VA613_05370 (dcm)
Enzymes [BR:
tsw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
VA613_05370 (dcm)
Transcription factors [BR:
tsw03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
VA613_05370 (dcm)
DNA replication proteins [BR:
tsw03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
VA613_05370 (dcm)
Chromosome and associated proteins [BR:
tsw03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
VA613_05370 (dcm)
Prokaryotic defense system [BR:
tsw02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
VA613_05370 (dcm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
HTH_28
HTH_23
YdaS_toxin
HTH_29
HTH_17
Sigma70_r4_2
HTH_Tnp_ISL3
P22_Cro
Terminase_5
CENP-B_N
PF0610-like_N
Motif
Other DBs
NCBI-ProteinID:
WRS40300
UniProt:
A0ABZ1CN22
LinkDB
All DBs
Position
1102209..1103483
Genome browser
AA seq
424 aa
AA seq
DB search
MATVLQTGPDRGMAARYLSAALQIHKQAEIARHLGVDARTVRRWVVEQSVPAHYAFGLQR
LLPMEFPFPDNASFTFIDLFAGIGGIRMAFEDLGGHCVFTSEWDGYAQKTYAENYPGGHQ
INGDITQVAASDIPDHDVLLAGFPCQPFSIAGVSKKNALGRAHGFACETQGTLFFDVARI
IEEKRPRAFLLENVKNLVSHDKGRTFDVIRRTLSDELGYHVQYRVIDGAHFVPQHRERII
IVGFREPTSFDFDALPMPAKGGHTMQEILHKVDGTEPNLPWDGDRFFNHSSCSVNEKYTL
TDKLWAYLQGYAEKHRAKGNGFGFGLVTQDSVARTLSARYYKDGSEILVYQGESKNPRRL
TPRECARLMGFPDTFRIPVSDTRAYKQFGNSVVVGVMAHVAKLMQPMLTANNREPELPLR
YRSL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggccacagtcctgcagaccggccccgaccgtggcatggcagcgcgctacctcagtgcg
gcgctacagattcacaagcaagcagagatcgcccgtcacttgggcgtggatgcgcgtacg
gttcggcgctgggtggttgagcagtcggtacctgcacactatgcctttggtctgcagcgt
ttgctgcccatggagttcccgttccctgacaacgcttcttttacgtttatcgatctcttt
gcgggtattggcggtatccgcatggcgtttgaggacctaggaggccattgtgtatttact
agtgagtgggacggctacgcgcaaaagacctacgcggaaaattacccgggtgggcatcag
attaacggcgatataacgcaggtcgcggcgtccgatattcccgatcatgatgtcttgctt
gctggtttcccctgtcagccgttttcaatagctggcgtcagcaaaaaaaatgctctcggg
cgtgcgcacggattcgcgtgcgaaacacagggtaccttgttcttcgatgtagctcggatt
atcgaggaaaagcgaccacgtgcctttctacttgagaacgtcaagaatctcgtgtcgcat
gataaaggtcgaacgttcgacgtaatacggcggacgctgtcggatgaacttggttatcac
gtccaatatcgggtgattgatggggcacatttcgtacctcagcatcgtgagcgcatcata
atcgtcggctttcgcgagccgacgagctttgattttgatgccctgccgatgcccgctaag
ggggggcacacaatgcaggagatattgcacaaggtggatggcaccgaacctaatttgcca
tgggacggggaccgtttcttcaaccattcgtcatgctcggttaacgaaaaatacacattg
accgacaagttatgggcttatttgcaggggtacgcggagaaacaccgggccaagggcaac
ggtttcggctttgggctggttactcaggattccgtggcgcgtaccttgtctgcccgctat
tacaaggatggatcggaaatccttgtctatcaaggagaaagcaaaaatccacgcaggttg
acgccacgtgagtgtgctcgattaatgggctttcccgacacatttcggattcctgtttcc
gatacccgtgcatacaaacaattcggcaattcggttgttgtaggtgtgatggcgcatgtt
gcaaagcttatgcagccgatgttgacagccaacaaccgggaacctgaactcccacttcga
tatcgatctttgtaa
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