Thiobacillus sedimenti: VA613_05460
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Entry
VA613_05460 CDS
T10461
Name
(GenBank) SAM-dependent methyltransferase
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
tsw Thiobacillus sedimenti
Brite
KEGG Orthology (KO) [BR:
tsw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsw03009
]
VA613_05460
Enzymes [BR:
tsw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
VA613_05460
Ribosome biogenesis [BR:
tsw03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
VA613_05460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
MAPEG
Motif
Other DBs
NCBI-ProteinID:
WRS40317
LinkDB
All DBs
Position
complement(1119631..1120353)
Genome browser
AA seq
240 aa
AA seq
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MRPKPIDVATLYLIPVPLGPVSPDACLPPDTLAVARRLQHFVVERAKTARAHLKAMGHPL
PLQSLHLEELNEHTPADDVAALLAPLKAGHDVGLLSEAGCPAVADPGAALVLAAHRADIP
VVPLVGPSAILLALMASGLGGQRFAFHGYLPAKEPERSQRIRELEKAARRDRATQLFIET
PYRSAALLDALAATLAPDTLVSVGADLSLPSQLIRTRSASAWRGQGATVKDRLVVFGIAA
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
gtgaggcccaaaccgattgacgtggcgacgctctacctgatcccggtgccgctcgggccg
gtcagccccgacgcctgcctgccgcccgacaccctcgccgtcgcgcgccggctgcagcat
ttcgtcgtcgagcgcgccaagaccgcgcgcgcccatctcaaggcgatgggccacccgctc
ccgctgcagtcgctgcatctggaggaactcaacgagcacacacccgccgacgacgtcgcc
gcgctgctggccccgctcaaggcgggccacgacgtcgggctgctgtcggaggccggctgc
cccgcggtggccgaccccggcgcggcgctcgtgctggcggcacaccgcgcggacattccg
gtggtgccgctcgtcggcccgtcggccatcctgctggcgctgatggcctcggggctcggc
ggccagcgcttcgcgttccacggctacctgccggcgaaggaacccgaacgcagccagagg
atccgcgagctggagaaggccgcgcgccgcgatcgcgccacccagctcttcatcgaaacg
ccctatcgcagcgcggccctgctcgacgccctcgccgccacgctggcgccggacacgctc
gtcagcgtcggcgccgacctcagcctgcccagccagctgatccgcacccgcagcgcgagc
gcctggcgcggccagggcgcgacggtcaaggaccgattggtggtgttcgggatcgccgct
tag
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integrated database retrieval system
