Thiobacillus sedimenti: VA613_06385
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Entry
VA613_06385 CDS
T10461
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
tsw Thiobacillus sedimenti
Pathway
tsw02020
Two-component system
tsw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tsw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VA613_06385
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
VA613_06385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsw03021
]
VA613_06385
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
tsw02035
]
VA613_06385
Transcription machinery [BR:
tsw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VA613_06385
Bacterial motility proteins [BR:
tsw02035
]
Flagellar system
Flagellar assembly proteins
Stator
VA613_06385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
UPF0122
HTH_23
MarR
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
WRS40499
UniProt:
A0ABZ1CM82
LinkDB
All DBs
Position
1298481..1299221
Genome browser
AA seq
246 aa
AA seq
DB search
MYTATGKSEKSEKNDLLTQYMPMVKRLAHHMMGRLPPSVEEDDLVQAGMIGLLDAVSRYD
EAQSAQFEAYAIQRIRGSMIDELRQIDWMPRSARQSMRKIEQAINTLQHRLGRQPSETEI
SEYMKVPLAEYQAMLGDARGHQLLYFEDFGESDEDDSFLDKQSADEASMPLPQLLDANLR
ACIIAGIENLPEREQLLMSLYYEQELNLREIAEVFGVSESRICQLHGQAIARLRAKLKED
AWIVGA
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtataccgcaaccggcaaaagcgagaagagcgagaagaacgatttgctgacgcagtac
atgccgatggtgaagcgcctggcgcaccacatgatgggccgcctgccgcccagcgtcgag
gaggacgacctggtgcaggccggcatgatcggcctgctcgatgcggtcagccgctacgac
gaggcgcagagcgcgcagttcgaggcctacgccatccagcgcatccgcggctcgatgatc
gacgagctgcgccagatcgactggatgccgcgcagcgcgcggcagtcgatgcgcaagatc
gagcaggcgatcaacacgctgcagcacaggctcggccggcagccgagcgagaccgagatt
tccgagtacatgaaggtgccgctggccgaataccaggccatgctgggcgacgcgcgcggc
caccagctgctttatttcgaggacttcggcgaatccgacgaggacgactccttcctcgac
aagcagtcggccgacgaggcgagcatgccgctgccgcagctgctcgacgccaacctgcgc
gcctgcatcatcgccggcatcgagaacctccccgagcgtgaacagctgctgatgtccctt
tactacgagcaggaactcaacctgcgcgagatcgccgaggtgttcggcgtgtccgaatcg
cgcatctgccagctgcacggccaggccatcgcgcgcctgcgtgccaagctcaaggaagac
gcatggatcgtgggagcctga
DBGET
integrated database retrieval system
