KEGG   Thiobacillus sedimenti: VA613_06890
Entry
VA613_06890       CDS       T10461                                 
Name
(GenBank) type I restriction endonuclease subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
tsw  Thiobacillus sedimenti
Brite
KEGG Orthology (KO) [BR:tsw00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tsw02048]
    VA613_06890
Enzymes [BR:tsw01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     VA613_06890
Prokaryotic defense system [BR:tsw02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   VA613_06890
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N T1R_D3-like ResIII
Other DBs
NCBI-ProteinID: WRS40598
LinkDB
Position
complement(1419223..1422414)
AA seq 1063 aa
MNGISEDDVEQAMLEWLAGLGWSVAHGPDISPPDAKTPGTERDSYRDVALRHRLADAIAR
LNPHIPAGARDDALRRVLSPNVPALVSANRQLHRWLVDGVPVEFQKDGDTRGDRVRLLDF
ADVAANDWLAVNQFSVQGPALTRRPDVVLFVNGLPLVVVELKNPGDEEADIWAAWNQLQA
YQQDIPDLFHANALQVISDGIQARMGSLTSDRERFMAWRTIDGVTTDPLGAMRELETLVH
GLFQRDLLLEYLRHFILFEDDGQLIKKVAGYHQFHAVRAVVQSVLKASAPGGNRKGGVVW
HTQGAGKSIEMTCLAGALMAHPGMGNPTLVVVTDRNDLDNQLFGVFAGASEMLRETPVQA
DTRPDLRRLLANRPSGGIVFTTIQKFTPGEDEDMFPVLSDRRNIVVICDEAHRSQYGFEA
RLAGGEGRPTAANDATVLLAAEAGTTTSVLATGSSAVRYGYAQHLRNALPGATFVAFTGT
PVSLDDRDTRAVFGDYVHIYDIEQAVKDGATVPIYYESRLAKLELKEADVTLLDSEVDEL
TEDEEGDAAKVAKLRRWAALEQLVGAPPRIQKVAADIVAHFESRLAAMDGKAMVVAMSRD
ICVHLYDAIVALRPEWHSDDPAQGAIKVVMTGSASDKALLKPHIYPKDVRKRLETRFKNP
ADPFKLVIVRDMWLTGFDAPCLHTMYVDKPMRGHNLMQAIARVNRVFKDKPGGLVVDYIG
IANELKAALADYTRAKGRGKPTIDAREALAVLQEQMDVLHDMLHGVEYGDFRAKAWQLLP
AVANHVLGLDDGKKCFADTVLAASKAFALCCTLDEALGHRDELAFLQAVKAALTKHGGTD
KKLTDEQKEHALRQIISRAVVSDEVIDIFTAAGLKRPDIGVLSDEFLEDVRHMKERNLAV
ELLERLLKGEIKSRFKTNVVQEAKFSELLQQSLTRYRNRAIETAQVIEELIEMAKKFQEA
AQRGEALGLNHDEMAFYDALATNESAVRGLGDETLKKIAVELVQSLRKSVTVDWAVRETV
RARLRVMVKTLLKRYKYPPDKQEEATETVLKQAESLSAEWVVA
NT seq 3192 nt   +upstreamnt  +downstreamnt
gtgaacggcatcagcgaggacgacgtcgaacaggccatgctggaatggctggccggcctc
ggctggtcggtcgcccacggccccgacatctcgccgcctgacgccaagacccccggcacc
gagcgcgacagctaccgtgacgtggcgctgcggcaccgactcgccgacgccattgcccgc
ctgaatccgcacatcccggccggcgcccgcgacgacgcgctccgccgcgtgctcagcccc
aatgtgccggccttggtcagcgccaaccgccagctgcaccgatggctggtcgacggcgtg
ccggtggaattccaaaaggatggcgacacgcgcggcgaccgtgtgcggctgctggacttt
gccgatgtggcggccaacgactggctggcggtgaaccagttctcggtgcaaggccccgcg
ctcacgcgccgccccgatgtggtgcttttcgtgaacggcctgccgctggtcgtcgtcgag
ttgaagaaccccggcgacgaggaagccgacatctgggcggcttggaaccagctgcaggcc
taccagcaggatatccccgacctgttccacgccaacgcgctgcaggtgatttccgacggc
atccaggcgcgcatgggttcgctgaccagcgaccgcgagcggttcatggcctggcgcacc
atcgatggcgtgaccaccgacccgctgggggcgatgcgcgagctcgaaacgctggtgcat
gggctgttccagcgcgacctgctgctggagtacctgcgccacttcatcctgttcgaggac
gacggccagctcatcaagaaggtggcgggctaccaccagttccacgccgtgcgcgccgtg
gtgcagagcgtgctgaaggcctcggcacccggcggcaaccgcaaaggcggggtggtgtgg
catacccagggcgccggcaagagcatcgagatgacctgcctggcgggcgccttgatggcc
caccccggcatgggtaacccgaccttggtcgtggtgaccgaccgcaacgacctcgataac
cagctgttcggcgtcttcgcgggggcgagcgagatgctgcgcgaaacgcccgtgcaggcc
gacacgcgcccggacctgcgtcggctcttggccaaccggccgtcgggcggcatcgtcttc
accactatccagaagttcacgcccggcgaggacgaggacatgttccccgtgctctccgac
cgccgcaacatcgtggtcatctgcgacgaggcgcaccgcagccagtatggcttcgaggca
cggctggccggaggggagggcaggcccacggccgccaatgatgccaccgtgctgttggct
gccgaggccggaacaaccacttcggtgctggcgaccggcagcagcgccgtgcgctacggt
tacgcccagcacttgcgcaacgcgttgcccggcgcgaccttcgtcgccttcaccggcacg
ccggtctcgctggacgaccgcgacacgcgcgcggtgttcggcgactacgtccacatctac
gatatcgagcaggcggtcaaggacggcgccaccgtgcccatctactacgagagccgcttg
gccaagctggagctgaaggaagcggacgtgacgctgctcgacagcgaagtcgacgagctc
accgaggacgaggagggcgacgccgccaaggtggccaagctgcggcgctgggcggcgctg
gagcagctggtgggtgcgccgccgcgcatccagaaggtggcggcggacatcgtggcccac
ttcgagagccggctcgccgccatggacggcaaggccatggtcgtggcgatgagccgcgac
atctgtgtacacctatatgacgccatcgtcgcgctgcgcccggagtggcacagcgacgac
ccggcccagggcgccatcaaggtggtgatgaccggctcggcctctgacaaggcgctgctg
aagccgcacatctatcccaaggacgtccgcaagcggctggaaacccggttcaagaacccg
gccgacccgttcaagctcgttatcgtccgcgacatgtggctcacgggcttcgacgcgcca
tgcctgcacacgatgtacgtcgacaagccgatgcgcggccacaatttgatgcaagccatc
gccagggtgaaccgggtgttcaaggacaagcccggcggattggtcgtggattacatcggc
atcgccaacgagctcaaggccgcgctggcggactacacccgggccaagggccgcggcaag
ccgaccatcgacgcccgcgaggcgctggccgtgctgcaggagcagatggacgtgctccac
gacatgctgcacggcgtggagtacggcgacttccgggccaaggcctggcaactcctgccg
gccgtggccaaccacgtgctcggcttggacgacggcaagaagtgcttcgccgacacggtg
ctggccgccagcaaggcgttcgcgctgtgctgcaccttggacgaggccctgggtcaccgt
gacgaattggccttcctgcaggcggtgaaagccgcgctgaccaagcacggcgggaccgac
aagaaactgacggacgagcagaaggaacacgcgcttcggcaaatcatcagccgggccgtg
gtgagtgatgaggtcatcgacatctttacggcggctggcctcaaacgcccggatatcggc
gtgctgtccgacgagttccttgaagacgtgcgccacatgaaggagcgcaacctggccgtg
gaacttctggagcggctgctcaagggcgaaatcaagtcgcgcttcaagaccaacgtggtg
caggaggccaagttttccgagctcctgcagcagagcctgacgcgctaccgcaaccgggcc
atcgagaccgcccaggtcatcgaggagctcatcgagatggccaagaagttccaggaagcc
gcccagcgcggcgaggccctggggctgaaccacgacgaaatggcgttctacgacgccttg
gccactaatgaatccgcagtccgtggtttgggtgacgagacattaaagaagattgcggtc
gagttagtccaaagcctgcgcaagtcggtgacggttgactgggctgtccgggaaactgtc
cgggccaggctgcgcgtgatggttaagacgctgctcaagcgctacaagtatccgccggac
aagcaggaagaagcgactgagacagtattgaaacaggcggagtcactgtcggctgaatgg
gtggtcgcatga

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