Thiobacillus sedimenti: VA613_07440
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Entry
VA613_07440 CDS
T10461
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
tsw Thiobacillus sedimenti
Pathway
tsw00020
Citrate cycle (TCA cycle)
tsw00190
Oxidative phosphorylation
tsw00650
Butanoate metabolism
tsw00720
Other carbon fixation pathways
tsw01100
Metabolic pathways
tsw01110
Biosynthesis of secondary metabolites
tsw01120
Microbial metabolism in diverse environments
tsw01200
Carbon metabolism
Module
tsw_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
tsw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
VA613_07440 (sdhA)
00650 Butanoate metabolism
VA613_07440 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
VA613_07440 (sdhA)
00720 Other carbon fixation pathways
VA613_07440 (sdhA)
Enzymes [BR:
tsw01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
VA613_07440 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
DAO
HI0933_like
Thi4
GIDA
NAD_binding_7
FAD_oxidored
NAD_binding_8
Lycopene_cycl
FAD_binding_3
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
WRS37856
UniProt:
A0ABZ1CG13
LinkDB
All DBs
Position
complement(1528690..1530459)
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AA seq
589 aa
AA seq
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MNTRRFDALIIGGGGAGLRAALQLARSDYKVAVVSKVFPTRSHTVSAQGGITAALANVDD
DRWEWHMYDTVKGGDWLGDQDAIEFMCREAASAVYELEHMGLPFSRLDDGRIYQRPFGGQ
SKHFGGDQATRTCAAADRTGHALLHTLYQQNIKHRTQFFDEYFALDLVRDAEGYCLGVTA
MSIETGEPLLIEARATLLATGGAGRVFGNTSNAMINTGDGLGMVLRAGLPLQDMEFWQFH
PTGIAGVGCLITEGVRGEGGYLLNKDGERFMERYAPHAKDLAGRDVVARAIAIEIAEGRG
CGAASNQGGGDYVHLKLDHLGEAAIAQKLPGIRELAIRFAGVDPAEKPIPVAPTAHYMMG
GIPTNLHGQVVAPARFGPEEPVPGLYAVGECACVSVHGANRLGGNSLLDLVVFGRAAGRH
MLDTLRDNPYPRPLPAEAADASRARLARWERPGSERVAAISDDLRRAMQTHCGVFRTEAV
LREGLAKLDELEARLAHAGLTDTSRVFNTARIEALELENLVGVARATLVSALARTESRGA
HTREDFPQRDDDNWLRHTLYSREGDQIDTKPVRLKPLTVESIRPKERVY
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgcgccgcttcgacgcgctcatcatcggcggcggcggcgccggcctgcgtgcg
gcgctgcagctcgcgcgctccgactacaaggtcgcggtggtgtcgaaggtcttcccgacc
cgttcgcacaccgtgtcggcgcagggcggcatcaccgccgcgctcgccaacgtcgacgac
gaccgctgggaatggcacatgtacgacacggtcaagggcggcgactggctcggcgaccag
gacgcgatcgagttcatgtgtcgcgaggcggcctcggccgtgtacgagctggagcacatg
ggcctgccgttctcgcggctggacgacggcaggatctaccagcggccgttcggcggccag
tcgaagcatttcggcggcgaccaggcgacgcgcacctgcgccgccgccgaccgcaccggg
cacgcgctcttgcacacgctctaccagcagaacatcaagcaccgcacgcagttcttcgac
gagtacttcgcgctcgacctggtgcgcgacgccgaaggctattgcctcggcgtgacggcg
atgagcatcgagaccggcgagccgctgctgatcgaggcgcgcgcaacgctgctcgccacc
ggcggcgccgggcgcgtgttcggcaacaccagcaacgccatgatcaacaccggcgacggg
ctcggcatggtgctgcgcgccgggctgccgctgcaggacatggagttctggcagttccac
ccgaccggcattgccggcgtcggctgcctcatcaccgagggcgtgcgcggcgagggcggt
tatctcctgaacaaggacggcgagcgcttcatggaacgctatgcgccgcatgcgaaggac
ctcgccgggcgcgacgtcgtggcgcgcgcgatcgcgatcgagatcgccgaggggcgcggc
tgcggggctgcctccaatcaaggcggcggcgattatgtccatctcaagctcgaccacctg
ggcgaggccgccatcgcgcagaaattgcccggcatccgcgagctcgccatccgcttcgcc
ggcgtcgatccggccgagaagccgatcccggtcgcaccgaccgcgcactacatgatgggc
ggcatccccaccaacctgcacggccaggtcgtcgcaccggcgcgcttcgggccggaggaa
ccggtgccgggcctctacgcggtcggcgaatgcgcgtgcgtgtccgtacacggcgccaac
cgcctgggcggcaactcgctgctcgatctcgtcgtgttcggtcgtgccgccggccgccac
atgctcgacaccctgcgcgacaacccctatccgcggccgctgccggcggaggccgccgac
gccagccgcgcccgcctggcgcgctgggaacgcccgggcagcgagcgcgtcgcggcgatc
agcgacgacctgcggcgggccatgcagacgcattgcggcgtgttccgcaccgaggccgtg
ctgcgcgagggactcgcgaagctcgacgaactcgaagcccgcctcgcccacgccgggctc
acggacaccagtcgcgtcttcaacaccgcgcgcatcgaggcgctcgaactggagaacctc
gtcggcgtcgcgcgcgcgacgctggtctcggcgctggcgcgcaccgagagccgcggcgcc
cacacgcgcgaggacttcccgcagcgcgacgacgacaactggctgcggcatacgctgtat
tcgcgcgaaggcgaccagatcgacaccaagccggtgcggctgaagccgctgacggtggag
tcgatccggccgaaggaacgggtgtactga
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integrated database retrieval system
