Thiobacillus sedimenti: VA613_07555
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Entry
VA613_07555 CDS
T10461
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
tsw Thiobacillus sedimenti
Pathway
tsw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tsw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
VA613_07555 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsw03400
]
VA613_07555 (mutS)
DNA repair and recombination proteins [BR:
tsw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
VA613_07555 (mutS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
MutS_C
Rad17
Motif
Other DBs
NCBI-ProteinID:
WRS37877
UniProt:
A0ABZ1CET3
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All DBs
Position
1548559..1551117
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AA seq
852 aa
AA seq
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MTTAREAAGHTPMMQQYLGIKAQHPDMLLFYRMGDFYELFHEDAEKAARLLNITLTTRGA
SAGMPIKMAGVPYHSAEQYLARLLKLGESVVIAEQVGDPAASKGPVERQVTRIVTPGTLT
DSGLLDETRDTLILAIAPGADTLGLAWINLAAGRFQVSEIAPAALTALLSRVRPAEILAP
DDFALDAPCAVRRLAPWQFDSASAQARLAQQFGSRDLAGFGVADLPLAIAAAGALLDYIQ
ATQRTALPHIQSIRAERDGEFVQLDAATRRNLELTETLRGEPAPTLQSVLDTTATGMGTR
LLRHWLHHPLRDRDILSGRRDAIGVLADTPDSAAAISRALRGCADVERIGGRIALRNARP
RDLSGLRDTLALLPELAAVLPDDRARLRALRDALAARPDLHALLARAVQPEPASVLREGG
VIADGFDAELDELRALTRDAGAFLLELEARERARSGIGNLKVEYNKVHGFYIEVSRAQAD
KVPDDYRRRQTLKNAERYITPELKAFEDKALSAQERALAREKLLFDGLLDTLTPHVPDLL
AIAAALAEIDVLASQAERVGTLKLCAPDYTSEPGIVIRGGRHPVVEAQVEHFIANDVTLN
RTRQMLLITGPNMGGKSTYMRQVALITLMACCGLWVPATSARIGDIDQIFTRIGASDDLA
GGRSTFMVEMTETAHILHNASANSLVLLDEIGRGTSTFDGLALAWAVARHLVTATRAFTL
FATHYFELTQLAQEFRQLANVHLDAKEHGTDLVFLHAVEEGPASQSYGIQVARLAGVPSP
VIHAARRHLRELEDAQLQPGPQGDLFAAHLPNDEPPPHPALDQLRELDPDTLTPKAALDM
LYALKALTDTAP
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgccagggaggccgccggccacacgccgatgatgcagcagtacctcggcatc
aaggcgcagcatcccgacatgctgctgttctaccgcatgggcgacttctacgagctgttc
catgaggatgccgagaaagccgcacgactcctcaatatcacgctgaccacgcgcggcgcc
tcggccggcatgccgatcaaaatggctggcgtgccctaccacagcgccgagcagtacctg
gcccgcctgctgaagctgggcgaatcggtggtgatcgccgagcaggtcggcgatcccgcc
gcctcgaaaggcccggtcgagcgccaggtcacgcgcatcgtcacccccggcacgctgacc
gactcgggcctgctggacgagacgcgcgatacactcatcctcgcgatcgcgccgggtgcc
gatacgctcggcctggcctggatcaatctcgctgccggccgcttccaggtcagcgagatc
gcccctgccgcgctgactgccctgctctcccgcgtgcgcccggcggaaatcctggccccg
gacgacttcgcgctcgacgcgccctgcgcggtgcgccgcctggcgccgtggcagttcgac
tcggccagcgcgcaggcccggctcgcgcagcagttcggcagccgcgacctcgccggcttc
ggcgtcgccgacctgccgctcgccatcgcggccgccggcgccctgctcgactacatccag
gccacgcagcgcaccgcgctgccccacattcaatccatccgcgccgagcgcgacggcgag
ttcgtccagctcgacgccgccacccggcgcaacctcgagctcaccgagaccctgcgcggc
gagccggcgccgacgctgcagtcggtgctcgacaccaccgccaccggcatgggcacgcga
ctcttgcgccactggctgcaccacccgctgcgcgaccgcgacatcctgagcgggcggcgc
gacgccatcggggtgctcgccgacacgcccgacagcgccgccgcgatcagccgcgcgctg
aggggctgcgccgacgtcgagcgcatcggcggccgcatcgccctccgcaacgcccgcccg
cgcgacctctccggcctgcgcgacacgctcgcgctgctgcccgagctcgccgccgtcctg
cctgacgaccgcgcgcgcctgcgcgcgctgcgcgacgcacttgccgcccgtcccgacctg
cacgccctgctcgcccgcgcggtccagcccgagcccgccagcgtcttgcgcgaaggcggc
gtcatcgccgacggcttcgacgccgagctcgacgagctgcgcgcgctgacacgcgacgcc
ggcgccttcctgctggagctggaagcgcgcgagcgcgcacgcagcggcatcggcaatttg
aaagtcgagtacaacaaggtgcacggcttctatatcgaggtcagccgcgcgcaggcggac
aaggtgccggacgactaccgccgccggcagacactgaagaacgccgagcgctacatcacg
cccgaactgaaagccttcgaggacaaggcgctgtcggcgcaggaacgtgcgctggcccgc
gaaaaactgctgttcgacgggctgctcgacacgctgacgccacacgtccccgacctgctg
gcgatcgccgccgcgctcgccgagatcgacgtgctggcgagccaggccgagcgcgtcggc
acgctgaagctgtgcgcgcccgactacacgagcgagcccggcatcgtcatccgcggcggc
cgccatccggtggtcgaggcccaggtcgagcacttcatcgccaacgacgtcacgctcaac
cgcacccggcagatgctgctcatcaccggccccaacatgggcggcaagtcgacctacatg
cgccaggtcgcgctgatcacgctgatggcatgctgcggcctgtgggtgcccgcaacgtcg
gcgaggatcggcgacatcgaccagatcttcacccgcatcggcgcctcggacgacctcgcc
ggcggacgctcgaccttcatggtcgagatgaccgagaccgcccacatcctgcacaacgcc
agtgccaacagtctcgtattgctcgacgagatcggccgcggcacctcgaccttcgacggt
ctcgcgctggcgtgggcggtggcgcgccatctggtgaccgcgacgcgtgcgttcacgctg
ttcgccacccattatttcgagctgacccagctggcgcaggagttccgccaactcgccaac
gtccacctcgacgccaaggaacacggcaccgacctggtgttcctgcacgcggtcgaggaa
ggaccggcctcgcagagctacggcattcaggtggcgcggctggccggcgtcccgagcccg
gtgatccatgccgcgcgccgccacctgcgcgaactggaagacgcgcagctgcagcccggc
ccccagggcgacctgttcgccgcacacctgcccaacgacgagccgccgccgcatcctgcg
ctcgaccagctgcgcgagctcgaccccgatacgctcacgccgaaggcggcgctggacatg
ctctatgccttgaaggcgctcacggatacggcgccatga
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