Thiobacillus sedimenti: VA613_08055
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Entry
VA613_08055 CDS
T10461
Name
(GenBank) EAL domain-containing protein
Organism
tsw Thiobacillus sedimenti
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS_3
PAS
PAS_4
GAF_2
GAF
PAS_8
GAF_3
PAS_12
Motif
Other DBs
NCBI-ProteinID:
WRS37975
LinkDB
All DBs
Position
1644869..1648477
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AA seq
1202 aa
AA seq
DB search
MTSADGFDLPRSSESDARGDRVARQHLALLEASVARLNDIVLITEADPCDEPGPRIVFVN
DAFERITGYRREEVLGRSPRFLQGPLTDRRELDRIRAAIAKHEPVHSELINYTKAGTPVW
LELDIVPVADAGGRTTHFVAVQRDITERKRVIQALHASEERFKSVARVTSDTIWDWDLAT
DRLWWSEGLQGTFGHAPADLPPDSRGWTEQLHPDDRERVLQNVRHAIDGGGESWASEYRF
RRKDGRYAYVLDRGSVIRDETGRAIRMVGGMTDLTSRNEAELELARLNRALRVRSACDEA
VVHATDEQALLNDICRIAVNVGGYRMAWVGYVQDDDAQSVRPVAHAGRGAGEYLEGIQLS
RLPATPAGRGPVGRALRSHEVIVIEDLEREPGFEPWLDAALRQGYRSLVTLPLHDAERTY
GVFALFAPDVSHISPDEVRLLQELTDDLAYAIATLRARLEQDRIQAAVLKIAAGVSVASG
SAFFEELVGRMTEALGADAGFIARIQPGEPPSARTEVAYVEGRLIPNFEYPLAGTPCAHL
AESRSYVIPAQAGERFPCTAGLCTRGAQAYVGHRLDNSAGEPIGQLFVLFSHPLRDTAFI
TSTLQIFATRVASELERQTTDARLRQQASLLDKAQDAIMVRDLDHVVRYWNKGAERLYGW
THDEVLGRSTEALLYSDPAAFRENTVKVLEHGEWSGEITQHRKDGSTLIVEAHWTLLRDD
QQRPEAILAINTDITERKAAEREIQYLAFYDHLTGLPNRQLLRDRLQHALAVEARSQQVG
ALLFIDVDNFKTLNDTLGHAIGDLFLQQLAGRLQACLRKGDTLARLGGDEFVIVLENLAA
APRDAATLATAVGEKILAGFATPFQLADYVHHCTASIGITLFNDQPATQDELLQRADLAM
YQAKAQGRNTLRFFDPAMQAVVAARAELEAELRGALARHAFELHYQAQVDSLGRLCGAEA
LLRWHHPERGWIPPISFIPLAEETGLILPIGLGVLESACMQLVAWATLPHMAGLSVAVNV
SARQFRQADFVDQVLQVIDRTGANPHRLKLELTESLLVDNMEETIVKMRALKARGIGFSL
DDFGTGYSSLAYLKQLPLDEIKIDQSFVRDVLTDPNDASIAHSILALGQGLNLAVVAEGV
ETAEQHAFLAKHGCDAYQGYLFNKPQPASIFEAWARSHQGCAAAARHPASIAPPAATRSV
SP
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcgctgacggcttcgacctcccccgctcctccgaatcggacgcccgcggcgac
cgggtggcgcggcaacacctcgccctgctcgaggccagcgtcgcccggctcaacgacatc
gtcctcattaccgaggccgatccctgcgacgagcccggcccgcgcatcgtgttcgtcaac
gacgccttcgagcggatcacgggctatcggcgcgaggaggtcctcgggcgttcgccgcgc
ttcctgcagggtccgctgaccgaccggcgcgagctcgaccgcatccgggccgcgatcgcg
aagcacgagccggttcacagcgaactcatcaactacaccaaggccggcacgccggtctgg
ctcgagctcgacatcgtcccggtcgccgacgccggcggccgcaccacgcacttcgtggcg
gtgcagcgcgacatcaccgagcgcaagcgcgtcatccaggcgctccacgccagcgaggag
cgcttcaagagcgtggcccgcgtcacctcggacacgatctgggactgggacctggcaacc
gatcgcctctggtggagcgagggcctgcagggcaccttcggccacgcgcccgcggacctg
ccgcccgacagccgcggctggaccgagcagcttcaccccgacgaccgcgaacgcgtgctg
cagaacgtccgccatgcgatcgacggcggcggcgagagctgggcgtccgaatatcgcttc
cgccgcaaggatggccgctatgcctacgtgctcgaccgcggttcggtgatccgcgacgag
accggacgcgcgatccgcatggtgggggggatgaccgatctcaccagccgcaacgaggcc
gagctcgagctcgcgcgcctcaaccgtgcgctgcgcgtgcgcagcgcctgcgacgaggcg
gtggttcatgccaccgacgagcaggccctgctgaacgacatctgccgcatcgccgtcaac
gtcggcggctaccgcatggcgtgggtcggctacgtgcaggacgacgacgcccagtcggtc
cggcccgtggcccacgccggcaggggcgccggcgagtacctcgaggggatccaactcagc
cgcttgcccgccacgccggccggccgcggcccggtcgggcgcgcgctgcgcagccacgag
gtgatcgtgatcgaggatctggaacgcgagcccggcttcgagccctggctggatgccgca
ctgcgccagggctaccgcagcctggtgacgctgccgctgcacgacgccgagcggacctac
ggcgtcttcgccctgttcgcgcccgacgtgagccacatcagccccgacgaggtgcgcctg
ctgcaggaactcaccgacgacctcgcctacgccatcgcgacgctgcgcgcccgcctcgag
caggaccgcatccaggccgccgtgctgaagatcgccgccggcgtttccgtggcgtccgga
agtgccttcttcgaggaactggtcggcaggatgaccgaggcgctcggtgccgatgccggc
ttcatcgcgcgcatccagcccggggagcccccctcggcgcgtaccgaggtcgcctacgtc
gaaggccgcctgatccccaatttcgaatatccgctggccgggacgccctgcgcgcatctt
gccgagtcgcgcagctacgtgattcccgcgcaggccggcgagcgcttcccgtgcacggcc
gggctctgcacgcgcggcgcgcaagcctacgtcgggcaccgcctcgacaattcggccggc
gaaccgatcggccagctgttcgtcctgttcagtcaccccctcagggacacggccttcatc
acgtcgacgctgcagatcttcgccacccgggtcgcatccgagctcgaacgccagaccacc
gacgcccgcctccggcagcaggcatcgctgctcgacaaggcgcaggacgcgatcatggtg
cgcgacctcgaccacgtcgtccgttactggaacaagggcgccgagcgtttgtacggctgg
acccacgacgaagtgcttggccgctcgaccgaggcgctgctgtacagcgatcccgcggcc
ttccgcgagaacaccgtcaaggtgctcgagcacggcgagtggagcggcgagatcacccag
caccgcaaggacgggagcacgctcatcgtcgaggcgcactggaccctgctgcgcgacgac
cagcagcggccggaagcgatcctcgcgatcaacaccgacatcaccgagcgcaaggccgcc
gagcgcgaaatccagtatctcgcgttctacgaccacctcaccggcctgcccaaccgccag
ctgctgcgcgaccgcctgcagcacgccctcgcggtcgaggcgcgcagccagcaggtcggt
gccttgctcttcatcgacgtcgacaatttcaagacgctcaacgacaccctgggccacgcc
atcggcgatctcttcctgcagcagctcgccggccgcctgcaggcctgcctgcgcaagggc
gacacgctggcgcgcctgggcggcgacgaattcgtcatcgtgctggagaacctggcggcc
gcgccgcgcgacgccgccacgctcgcgaccgcggtcggggaaaagatcctcgcgggcttc
gcgacgcctttccagctggccgactacgtccaccactgcacggccagcatcggcatcacg
ctcttcaacgaccagccggccacgcaggacgaactgctgcagcgcgccgacctggcgatg
taccaggccaaggcgcagggccgcaacaccctccgcttcttcgaccccgcgatgcaggcc
gtggtcgccgcgcgcgcggagctcgaggcggagctgcgcggcgcgctggcccggcatgcc
ttcgagctccattaccaggcgcaggtcgacagcctgggccgcctgtgcggcgccgaggcg
ctgctgcgctggcatcaccccgaacgcggctggatcccgcccatctccttcattcccctc
gccgaggagaccgggctgatcctgccgatcggcctcggcgtgctcgaatcggcctgcatg
cagctcgtcgcgtgggcgacgctgccgcacatggccggcctcagcgtggcggtgaacgtg
agcgcgcgccagttccgccaggcggatttcgtcgaccaggtgctgcaggtgatcgaccgc
accggcgccaacccgcaccgcctgaagctggagctgaccgagagcctgctggtcgacaac
atggaggaaaccatcgtcaagatgcgcgcgctgaaggcgcgcggcatcggcttctcgctc
gacgacttcggtaccggttattcctcgctcgcgtacctgaagcagctgccgctcgacgaa
atcaagatcgaccaatcgttcgtccgcgacgtcctcaccgatcccaacgacgcctcgatc
gcgcacagcattctggccctcggccaggggctgaacctcgccgtggtcgccgaaggcgtc
gaaaccgcggagcagcatgccttcctcgccaagcacggctgcgatgcctatcagggctat
ctgttcaacaagcctcaaccggcgtccatcttcgaggcgtgggcgcgcagccaccagggc
tgcgccgcagccgcccggcatccggcttccatcgccccgcctgccgccacgaggagcgtg
tcgccatga
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