Thiobacillus sedimenti: VA613_08220
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Entry
VA613_08220 CDS
T10461
Symbol
pheT
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
tsw Thiobacillus sedimenti
Pathway
tsw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tsw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VA613_08220 (pheT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tsw01007
]
VA613_08220 (pheT)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsw03016
]
VA613_08220 (pheT)
Enzymes [BR:
tsw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
VA613_08220 (pheT)
Amino acid related enzymes [BR:
tsw01007
]
Aminoacyl-tRNA synthetase
Class II (U)
VA613_08220 (pheT)
Transfer RNA biogenesis [BR:
tsw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
VA613_08220 (pheT)
Prokaryotic type
VA613_08220 (pheT)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
VapB_antitoxin
Motif
Other DBs
NCBI-ProteinID:
WRS38005
LinkDB
All DBs
Position
complement(1674839..1677184)
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AA seq
781 aa
AA seq
DB search
MQFSEAWLRSLVNPALDTAQLAHAVTMAGLEVEALAPAAPPFNNVVVAEILSAEKHPDAD
RLRVCQVDVGEAAPVTIVCGAPNAAAGLKVPCARPGAKLPGIEIKVAKVRGVESFGMLCS
TKELGLEGAADGLMVLPDDAPVGEDFRSWLSLDDTLITLKLTPNRADCLSLAGLAREIGA
ITGAPVHLPQIAEVAPTIGDTVAVQVAAPDACPRYLARVVRGIDAQAQTPRWMAERLERS
GIRPLLAPVDITNYVLLELGQPMHAFALSRLDGGIEVRLARAGETLELLNGQTAELAPDM
LVIADATGPVALAGIMGGQPTSVEKFTVDLMLEAAFFAPAAIAGRARRLGLSTDSSHRFE
RGVDFGATRQAMERATQLLVDICGGQPGPVTEAVADLPKREPITLRLARLTRVAGVELDA
GQVAAGLAALGAAVERRDDNLIVTPPSFRFDLAIEEDLIEEAVRLFGYDNIPAQPPAAPS
RMLPQDEKVVAEDALRQTLVDLDYQEVVTYSFVDPAWETALDPAACPLPLANPIASQLSA
MRTTLWGGLIETLRHNLNRQQDRVRVFELGRVYASLDAQPLKLGGLAYGDAAPEQWGTKA
RRVDFFDVKGDLERLFGRALDVRRGAHPALHPGQCAEVCAGGRAVGWVGTLHPRLVQAFD
LPAAPVLFELDSEAVTRRALPRHGGLSRFPQVRRDLAFVLDAHTPAGELVDVLREAAASW
VRTIDVFDEYRGKGVPENQKSLAIRVVMQDTERTLTDQEVEDAVQKLVDAALRQCNASLR
A
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgcaattctccgaagcctggctgcgcagcctggtcaaccctgcgctcgataccgcccag
ctcgcccacgccgtgaccatggcggggctcgaggtcgaggcgctggccccggccgcgccg
ccgttcaacaacgtcgtggtggccgagatcctctcggccgagaagcatcccgacgccgac
cgcctgcgtgtctgccaggtcgacgtcggcgaggccgcgccggtcaccatcgtgtgcggt
gcacccaatgccgcggccggcctcaaggtgccgtgcgcccgcccgggggcgaagctgccc
ggcatcgagatcaaggtcgccaaggtgcgcggcgtcgagtccttcggcatgctgtgctcg
accaaggagctgggcctggaaggcgccgccgacggcttgatggtgctgccggacgacgca
cccgtgggcgaggatttccgcagctggctcagcctcgacgacaccctgatcacgttgaag
ctcacgcccaaccgcgccgactgcctgtcgctcgccggcctcgcgcgcgagatcggtgcg
atcaccggcgcgccggtgcatctgccgcagatcgccgaggtcgcgccgacgatcggcgac
acggtcgccgtgcaggtcgcggctcccgacgcctgtccgcgctatctcgcccgcgtggtg
cgcggcatcgacgcgcaggcgcagacgccgcgctggatggccgaacgcctggagcgcagc
ggcatccgccccttgctcgcgccggtcgacatcaccaattacgtgctgctcgaactcggc
cagccgatgcatgccttcgcattgtcgcgcctcgacggcggcatcgaggtgcgcctggcg
cgcgccggcgagacgctcgaattgctgaacggccagaccgccgagctcgcgcccgacatg
ctggtgatcgccgacgccaccggcccggtcgcgctcgccggcatcatgggcgggcagccg
accagcgtcgagaaattcaccgtcgacctcatgctggaggccgcgttcttcgcgccggcg
gcgatcgccggccgtgcccgccggctcggcctgtcgaccgattcctcgcaccgcttcgag
cgcggcgtcgacttcggcgccacccgccaggcgatggagcgcgcgacgcagttgctcgtc
gacatctgcggcggccagcccggacccgtcaccgaagccgtggccgacctgccgaagcgc
gagccgatcaccctgcgcctggcgcgcctcacgcgcgtcgccggcgtcgagctcgacgcc
ggccaggtggcggcgggcctggcggcgctgggcgcggcagtcgagcgccgcgacgacaat
ctgatcgtcaccccgccgagcttccgctttgacctcgcgatcgaggaggacctgatcgag
gaggcggtgcgcctgttcggctacgacaacatccccgcgcagccgccggcggcgccgtcg
cgcatgctgccgcaggacgagaaggtggtcgcggaggatgcgctgcggcagacgctggtc
gatctcgactatcaggaagtcgtcacctacagcttcgtcgacccggcgtgggagaccgcg
ctcgaccccgcggcatgcccgctgccgctcgccaacccgatcgccagccagctctccgcg
atgcgcaccacgctgtggggcgggttgatcgagacgctgcgccacaacctgaatcgccag
caggatcgcgtgcgcgtcttcgagctgggccgcgtctacgcatcgctcgacgcgcagccg
ctgaagctcggcggcctggcctacggcgacgccgcgccggagcagtggggcacgaaggcg
cgccgcgtcgatttcttcgacgtgaagggcgatctcgaacgcctgttcggccgtgcgctc
gacgtgcgtcgcggcgctcatcccgcgctgcatccgggccaatgcgccgaggtgtgcgcg
ggcggccgcgccgtcggctgggtcggcacgctgcacccgcgtctggtgcaggcattcgac
ctgccggcggcgccggtgctgttcgagctcgacagcgaggccgtcacccgccgtgcgctg
ccgcgccatggcgggctgtcgcgcttcccgcaagtgcggcgcgacctcgcgttcgtgctg
gatgcgcacacgccggcgggcgagctggtcgacgtcctgcgcgaggccgcggcaagctgg
gtgcgcaccatcgacgtgttcgacgaataccgcggaaagggcgtgccggaaaaccaaaaa
agccttgcaatccgggtagttatgcaagatactgaacgcacattgacggatcaggaagtg
gaagatgcagtgcagaaactggtcgatgccgcgcttcgtcagtgcaatgccagtctgcgt
gcctga
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