Thiobacillus sedimenti: VA613_10400
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Entry
VA613_10400 CDS
T10461
Name
(GenBank) hypothetical protein
KO
K12990
rhamnosyltransferase [EC:2.4.1.-]
Organism
tsw Thiobacillus sedimenti
Pathway
tsw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tsw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VA613_10400
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
tsw01005
]
VA613_10400
Lipopolysaccharide biosynthesis proteins [BR:
tsw01005
]
O-antigen repeat unit
VA613_10400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
Motif
Other DBs
NCBI-ProteinID:
WRS38413
LinkDB
All DBs
Position
2101542..2102468
Genome browser
AA seq
308 aa
AA seq
DB search
MRAAGNEVTLAPPADTGRLCAVVVSYFPDDGLPSRVARIAAQAGKVFLVDNATTGPAIGA
IEAAAHQANVVLLRNANNRGVAGGLNAGLDAALREGFACAILFDQNSDPDPALASTLLAL
WRDLAASDRPALLGTNYIDRHRDRPALHCADGEQVAAQTAVIISGTLLSLEAYKAIGPFR
EEFFMDLVDTDFCHRARNLGYGVYASCEPLMQHAVGHATSRSILGHRIWVSNHPAWRRYL
MVRNSLILQAEAGQSGAGWLLRTFAKQLRKSLHVLLYEKDGLAKVRAMWRGFRDGIRRDT
RCKPWEPS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgctgcgggcaacgaagtgacattggcccccccggcagacaccgggcgactctgc
gccgtcgtcgtcagctactttcccgacgacggattgccgtcgagggttgcccggattgcg
gcgcaggccggcaaggtcttcttggtcgacaacgccaccaccgggccggccatcggcgcg
atcgaagccgcagcgcatcaggccaacgtcgtgcttctgcgcaacgcgaacaaccgcggc
gtggccggcggactcaacgccggtctcgacgcagccctgcgcgaggggttcgcatgcgcg
atcctattcgaccagaacagcgacccggacccggcgctggcctccacgctccttgccctg
tggcgcgatttggcggcatccgatcgccccgcactgctgggcaccaattacatcgaccgc
caccgcgatcgccccgccctgcactgcgccgatggggagcaagtcgccgcacagacggcc
gtcatcatctccggcacgctgctctcactcgaagcctataaggccatcggccccttccgg
gaagaattcttcatggatctggtcgacacggacttctgccatcgcgcgaggaacctcggc
tacggtgtctacgcttcctgcgagcccctgatgcagcacgccgtggggcatgccacctcg
cgcagcattctcggccatcggatatgggtaagcaatcatccggcgtggcggcgctacctg
atggttcgcaacagcctgatcctgcaggccgaggccggccagtccggtgcgggttggctg
ttgcgtactttcgcgaagcagctcaggaaaagccttcacgtgctgctgtacgagaaggat
gggctcgccaaggtacgcgccatgtggcgcggattccgcgacggcatccgccgggacacg
cgatgcaagccgtgggagccttcgtga
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