KEGG   Thiobacillus sedimenti: VA613_10560
Entry
VA613_10560       CDS       T10461                                 
Name
(GenBank) FimV/HubP family polar landmark protein
  KO
K08086  pilus assembly protein FimV
Organism
tsw  Thiobacillus sedimenti
Brite
KEGG Orthology (KO) [BR:tsw00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tsw02044]
    VA613_10560
Secretion system [BR:tsw02044]
 Type II secretion system
  Pilin secretion/fimbrial assembly protein
   VA613_10560
SSDB
Motif
Pfam: TPR_19 TPR_14 TPR_6 LysM TPR_8 CENP-F_leu_zip ATG16
Other DBs
NCBI-ProteinID: WRS38444
LinkDB
Position
complement(2129819..2132251)
AA seq 810 aa
MKLKRFTTHLVAAGLIAMPLMGHAAGLGKLSVSSALGQPLTAEIEVFAADKAELDSLSAS
LASGQAFRDAHVEFAPVLSTLRFSVEKKPSGKAVLKVTSSGPVNDPFIDMLVELNWGAGR
LVREYTVLLDPPGMAAKQTVAPAPAVAAPAIGAKPAAQPSPAAPAAAAPKAAAAAPAAKP
APSGAAPDHITVKRGDTLAAIAHRVRPEGVSLEQTLVGLYRDNTQSFDGNMNRLKAGKTL
AVPSSEKLAAIPQTDAVHELRLQAEDWRAYRQRLAAAVSAAPAAKAAPGQAASGKITPKV
EDHAKPAPEAQKDVLKLSKGAPAAAGGAGTDAARALQEKLRAQEEDATAREKALQESQQR
VAALEKQVQDMQKLVAMKEKAQAEPAAAAPPAPPKPAAAAPAPKPAPAPTVAKPVPAPAT
PGVSAPPAAPEPSTNWYDPLLADPLYWGGGVAALGLGGVLWWMMAGGRRRKPANTGLDDS
IMTGGDVRPNTVIGAASGGAVNTGDTSFLTDFSQAGLGTIDTHDVDPIAEAEVYMAYGRD
AQAEEILKEAIGKNPDRHEIRVKLLEIYAARRNTSAFESVAGELYAALGTKESPLWDKAC
EMGRSIDPTNPLYGGVQAGASPAATVAATAAVAGGAVAFASEPAAAEPVVEAAPVAEAEP
AAEPEPVADTAPLEFESAGHGLNFDAAAEPEKAPEAPAAGYVEMDTQGLNFDLPDLDLPP
VEDDTLKLDLGLEDDNGPDSKFDFSGLDLDLGESGDSELELDEVGTKLDLARAYVEMGDK
EGAREILNEVLAEGSQKQKSDAQGMLSALG
NT seq 2433 nt   +upstreamnt  +downstreamnt
atgaaattgaagcgcttcaccacccacctggtggctgccggcttgatcgccatgccgctg
atggggcacgccgccgggctgggcaagctgtcggtcagttcggcgctggggcagccgctg
acggcggaaatcgaggtgttcgccgccgacaaggccgagctcgacagcctgtcggccagc
ctggcatcgggccaggcgttccgcgatgcgcatgtcgaattcgctcccgtgctctccacc
ctgcgtttttcggtcgagaaaaagccgagcggcaaggccgttctgaaggtcacctcgagc
ggtccggtcaacgatcccttcatcgacatgctggtcgaactgaactggggcgccggtcgg
ctggtgcgagaatacacggtgctgctcgatccgccgggcatggccgccaagcagaccgtg
gcgcccgcgcccgctgtcgccgccccggcgatcggcgcgaaaccagcggcacagccgagc
ccggctgcgccggcagcggccgcgcccaaagccgctgcggccgcgccggccgccaagcct
gcgccgagcggcgccgcccccgaccacatcaccgtcaagcgcggcgatacgctggccgcc
atcgcccaccgcgtccgtccggaaggggtgagcctggagcagaccctggtggggctgtac
cgtgacaatacccagtcgttcgacggcaacatgaaccgcctcaaggccggcaagaccctg
gccgtgccgtcgtccgagaaactggcggccattccgcagaccgacgcggtgcacgaactc
cggctgcaagcggaagactggcgcgcctaccggcagcgcctcgcggctgcggtgagcgcc
gcccccgcagccaaggccgcgcccggccaggctgcgagcggcaagatcacgcccaaggtg
gaagaccacgcgaagccggcgcccgaggcgcagaaggatgtgctgaagctgtcgaagggt
gcgccggctgctgccggtggcgcggggaccgacgccgcgcgcgcgctccaggagaagctg
cgcgcccaggaagaagacgcgaccgcgcgcgagaaagcgctgcaggaatcgcagcagcgc
gtcgcggccctggaaaagcaggtccaggacatgcagaagctggtcgcgatgaaggaaaag
gctcaggccgaacctgccgccgccgcgcccccggcgccgcccaagccggccgccgctgca
cctgcgcccaagccggctccggcaccgacggttgccaagccagtgccggcgccggcgacc
ccgggggtgagcgcgccgccggccgccccggagccgtccacgaactggtacgaccccttg
ctcgccgacccgctctattggggcggcggcgtcgctgcgctgggcctgggcggcgtgctc
tggtggatgatggccggcggtcgccgccgcaagcccgcgaacaccggactcgacgacagc
atcatgaccggcggcgacgtgcgcccgaacacggtcatcggcgcggcatcggggggggcc
gtgaataccggcgacacgtccttcctgaccgacttcagccaggcggggctgggcaccatc
gacacccacgacgtcgacccgatcgccgaagccgaggtctacatggcctacggccgcgac
gcccaggccgaggagatcctcaaggaagcgatcggcaagaatccggaccggcacgagatt
cgcgtcaagctgctggaaatctatgcggcgcgccgcaacacgagcgcgttcgagtcggtt
gcaggggaactctatgccgccctcggcacgaaggagagcccgctgtgggacaaggcctgc
gagatgggccgcagcatcgatccgaccaacccgctgtacggcggcgtccaggccggcgcg
tcgccggctgcgaccgtggccgcgacggcggcagtggctggcggtgcggtggcctttgcg
agcgaacccgctgcggcggagccggttgtcgaggctgcgccggtggcggaagccgagccc
gcagccgagccggagccggtggccgacacggcgccgctcgagttcgagtccgccgggcat
ggcctcaatttcgacgccgcggccgagccggagaaggcccccgaggcgcctgccgcaggc
tatgtggaaatggatacgcagggcctgaacttcgacctgcccgacctcgacctgcctccg
gtggaggacgacaccctgaagctcgaccttgggctggaagacgacaacggcccggacagc
aagttcgacttcagcgggctggatctcgacctcggcgagtccggcgacagcgaactcgaa
ctcgacgaagtgggcaccaagctcgatctcgcccgcgcctacgtggaaatgggcgacaag
gaaggcgcgcgcgagattctcaacgaggtgctcgcggagggcagccagaagcagaaatcc
gatgcccaggggatgttgagcgcgcttggctga

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