Thiobacillus sedimenti: VA613_11820
Help
Entry
VA613_11820 CDS
T10461
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
tsw Thiobacillus sedimenti
Pathway
tsw00260
Glycine, serine and threonine metabolism
tsw00460
Cyanoamino acid metabolism
tsw00630
Glyoxylate and dicarboxylate metabolism
tsw00670
One carbon pool by folate
tsw00680
Methane metabolism
tsw01100
Metabolic pathways
tsw01110
Biosynthesis of secondary metabolites
tsw01120
Microbial metabolism in diverse environments
tsw01200
Carbon metabolism
tsw01230
Biosynthesis of amino acids
tsw01240
Biosynthesis of cofactors
tsw04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
tsw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VA613_11820 (glyA)
09102 Energy metabolism
00680 Methane metabolism
VA613_11820 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VA613_11820 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
VA613_11820 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VA613_11820 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
VA613_11820 (glyA)
Enzymes [BR:
tsw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
VA613_11820 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Aminotran_5
Cys_Met_Meta_PP
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WRS38685
UniProt:
A0ABZ1CH29
LinkDB
All DBs
Position
2373381..2374625
Genome browser
AA seq
414 aa
AA seq
DB search
MFNRQDTLAKTDPDLWAAIQKEDQRQQDHIELIASENYTSPAVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRVKALFGAEAANVQPNSGSQANQAVFMAFLKPGDTIMGMN
LAEGGHLTHGMALNMSGKWFNVVAYGLNEKQEIDYDRMEALAREHKPKLIIAGASAYALR
IDFERFAKIAKEIGAIFMVDMAHYAGLIAAGVYPNPVPHADVVTSTTHKTLRGPRGGIIL
MRAEHEKAINSAIFPGLQGGPLMHVIAGKATAFKEAASKEFKHYQEQVLANALVMCKVLI
ERGLAIISGRTESHVFLVDLRAKNLTGKEAEALLGRAHITVNKNSIPNDPQKPFVTSGIR
IGTPAMTTRGFKELEAEQLAHLIADVLDAPNDEAVIERVKGEVAKLTAKFPVYG
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaccgccaagacaccctcgccaagaccgaccccgacctgtgggccgcgatccag
aaagaagaccagcgccagcaggatcacatcgagctgatcgcgtcggaaaactacaccagc
ccggcggtgatgcaggcgcagggttcgcagctcaccaacaaatacgccgagggctacccc
ggcaagcgctactacggcggttgcgaatacgtcgacgtcgtcgagcagctggcgatcgat
cgcgtcaaggcgctgttcggcgccgaggcggccaacgtgcagcccaactccggttctcag
gccaaccaggcggtgttcatggccttcctcaagcctggcgacaccatcatgggcatgaac
ctcgccgagggcggccacctcacccacggcatggcgctcaacatgagcggcaaatggttc
aacgtcgtcgcctacggcctcaacgaaaagcaggaaatcgactacgacaggatggaagcg
ctggcgcgcgaacataaacccaaattgatcatcgccggcgcctcggcctacgcgctgcgc
atcgacttcgagcgcttcgccaagatcgccaaggaaatcggcgcgatcttcatggtcgac
atggcgcactacgcgggcctgatcgccgccggcgtctaccccaacccggtgccgcacgcc
gacgtcgtcacctcgaccacgcacaagaccctgcgcggcccgcgcggcggcatcatcctg
atgagggccgagcacgagaaggcgatcaattccgcgatcttccccggcctgcagggcggc
ccgctgatgcacgtcatcgccggcaaggcgacggcgttcaaggaagccgcgagcaaggaa
ttcaagcattaccaggagcaggtgctcgccaacgcgctggtgatgtgcaaggtgctgatc
gagcgcgggctggccatcatctccggccgtaccgagagccacgtgttcctggtcgacctg
cgcgccaagaacctcaccggcaaggaagccgaggcgctcctgggccgcgcccacatcacg
gtcaacaagaactcgatccccaacgacccgcagaagcccttcgtcaccagcggcatccgc
atcggcacgccggcgatgacgacgcgcggcttcaaggagctcgaggccgagcaactcgcc
cacctgatcgccgacgtgctcgacgcgccgaacgacgaggcggtgatcgagcgcgtgaag
ggcgaagtggcgaagctgacggcgaagtttccggtgtatgggtga
DBGET
integrated database retrieval system