KEGG   Thiobacillus sedimenti: VA613_11820
Entry
VA613_11820       CDS       T10461                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
tsw  Thiobacillus sedimenti
Pathway
tsw00260  Glycine, serine and threonine metabolism
tsw00460  Cyanoamino acid metabolism
tsw00630  Glyoxylate and dicarboxylate metabolism
tsw00670  One carbon pool by folate
tsw00680  Methane metabolism
tsw01100  Metabolic pathways
tsw01110  Biosynthesis of secondary metabolites
tsw01120  Microbial metabolism in diverse environments
tsw01200  Carbon metabolism
tsw01230  Biosynthesis of amino acids
tsw01240  Biosynthesis of cofactors
tsw04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:tsw00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    VA613_11820 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    VA613_11820 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    VA613_11820 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    VA613_11820 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    VA613_11820 (glyA)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    VA613_11820 (glyA)
Enzymes [BR:tsw01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     VA613_11820 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Aminotran_5 Cys_Met_Meta_PP Beta_elim_lyase
Other DBs
NCBI-ProteinID: WRS38685
UniProt: A0ABZ1CH29
LinkDB
Position
2373381..2374625
AA seq 414 aa
MFNRQDTLAKTDPDLWAAIQKEDQRQQDHIELIASENYTSPAVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRVKALFGAEAANVQPNSGSQANQAVFMAFLKPGDTIMGMN
LAEGGHLTHGMALNMSGKWFNVVAYGLNEKQEIDYDRMEALAREHKPKLIIAGASAYALR
IDFERFAKIAKEIGAIFMVDMAHYAGLIAAGVYPNPVPHADVVTSTTHKTLRGPRGGIIL
MRAEHEKAINSAIFPGLQGGPLMHVIAGKATAFKEAASKEFKHYQEQVLANALVMCKVLI
ERGLAIISGRTESHVFLVDLRAKNLTGKEAEALLGRAHITVNKNSIPNDPQKPFVTSGIR
IGTPAMTTRGFKELEAEQLAHLIADVLDAPNDEAVIERVKGEVAKLTAKFPVYG
NT seq 1245 nt   +upstreamnt  +downstreamnt
atgttcaaccgccaagacaccctcgccaagaccgaccccgacctgtgggccgcgatccag
aaagaagaccagcgccagcaggatcacatcgagctgatcgcgtcggaaaactacaccagc
ccggcggtgatgcaggcgcagggttcgcagctcaccaacaaatacgccgagggctacccc
ggcaagcgctactacggcggttgcgaatacgtcgacgtcgtcgagcagctggcgatcgat
cgcgtcaaggcgctgttcggcgccgaggcggccaacgtgcagcccaactccggttctcag
gccaaccaggcggtgttcatggccttcctcaagcctggcgacaccatcatgggcatgaac
ctcgccgagggcggccacctcacccacggcatggcgctcaacatgagcggcaaatggttc
aacgtcgtcgcctacggcctcaacgaaaagcaggaaatcgactacgacaggatggaagcg
ctggcgcgcgaacataaacccaaattgatcatcgccggcgcctcggcctacgcgctgcgc
atcgacttcgagcgcttcgccaagatcgccaaggaaatcggcgcgatcttcatggtcgac
atggcgcactacgcgggcctgatcgccgccggcgtctaccccaacccggtgccgcacgcc
gacgtcgtcacctcgaccacgcacaagaccctgcgcggcccgcgcggcggcatcatcctg
atgagggccgagcacgagaaggcgatcaattccgcgatcttccccggcctgcagggcggc
ccgctgatgcacgtcatcgccggcaaggcgacggcgttcaaggaagccgcgagcaaggaa
ttcaagcattaccaggagcaggtgctcgccaacgcgctggtgatgtgcaaggtgctgatc
gagcgcgggctggccatcatctccggccgtaccgagagccacgtgttcctggtcgacctg
cgcgccaagaacctcaccggcaaggaagccgaggcgctcctgggccgcgcccacatcacg
gtcaacaagaactcgatccccaacgacccgcagaagcccttcgtcaccagcggcatccgc
atcggcacgccggcgatgacgacgcgcggcttcaaggagctcgaggccgagcaactcgcc
cacctgatcgccgacgtgctcgacgcgccgaacgacgaggcggtgatcgagcgcgtgaag
ggcgaagtggcgaagctgacggcgaagtttccggtgtatgggtga

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