Thiobacillus sedimenti: VA613_12230
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Entry
VA613_12230 CDS
T10461
Name
(GenBank) CmpA/NrtA family ABC transporter substrate-binding protein
KO
K15576
nitrate/nitrite transport system substrate-binding protein
Organism
tsw Thiobacillus sedimenti
Pathway
tsw00910
Nitrogen metabolism
tsw02010
ABC transporters
Module
tsw_M00615
Nitrate assimilation
Brite
KEGG Orthology (KO) [BR:
tsw00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
VA613_12230
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VA613_12230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsw02000
]
VA613_12230
Transporters [BR:
tsw02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Nitrate/nitrite transporter
VA613_12230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMT1_2
NMT1
Motif
Other DBs
NCBI-ProteinID:
WRS38761
UniProt:
A0ABZ1CHA3
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All DBs
Position
2444590..2445861
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AA seq
423 aa
AA seq
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MSDIPNKPLVQDPGKRDFMKKTTGLSVAAALMAMVPPGVRSGAWAAGSDAPEKPNLTVGF
IPLTDCASVVMASIKGFDRKYGLTLTPSKEASWAAVRDKLVNGELDAAHALYGLIYGVQM
GIGGPKKDMAVLATINNNGQAISLSNQLKAKGVTDGASLAKLVAAEPKEYTFAQTFPTGT
HAMWLYYWLAAYGINPFTQAKVITVPPPQMVANMRVDNMDGFCVGEPWNARAIRDHVGFT
AVTSQDIWKDHPEKVLGTTAEFVQRYPNTARAMVAAILDASKYIDTMSNRSEVAKIISAK
SYVNTDFDSIEDRMLGQYDNGIGRKWADANYMKFYNGGAVGFPYLSDGMWFLTQHKRWGL
LKEHPDYLAVAKKVNRIDIYKQAAAMTKTPLPKSDMRASKLIDGVVWDGRNPKAYADSFR
IKA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacatcccgaacaagcccctcgtacaggacccgggcaagcgtgacttcatgaaa
aagaccaccgggctttccgtcgcggccgccctcatggccatggtgccgcccggcgtgcgc
agcggcgcctgggccgccggctccgatgccccggagaaacccaacctcaccgtcggcttc
atcccgctgacggactgcgccagcgtggtgatggcctcgatcaagggcttcgacaggaaa
tacggcctcaccctcacgcccagcaaggaagcctcgtgggcggccgtgcgcgacaagctg
gtgaacggcgagctcgacgccgcgcacgcgctgtacggcctgatctacggcgtgcagatg
ggcatcggcgggccgaagaaggacatggcggtgctcgccacgatcaacaacaacggccag
gcgatctcgctgtcgaaccagctgaaggccaagggcgtgaccgacggcgcctcgcttgcc
aagctggtcgccgccgaacccaaggaatacaccttcgcccagaccttccccaccggcacc
cacgcgatgtggctctattactggctcgcggcctacggcatcaatcccttcacccaggcc
aaggtgatcaccgtgccgccgccgcagatggtcgcgaacatgcgcgtcgacaacatggac
ggcttctgcgtcggcgagccgtggaacgcgcgcgcgatccgcgaccacgtcggcttcacc
gccgtgacctcgcaggacatctggaaggaccacccggaaaaggtgctcggcaccaccgcc
gaattcgtgcagcgctatcccaacaccgcgcgtgcaatggtcgcggcgatcctcgatgcg
tcgaagtacatcgacacgatgagcaaccgctccgaggtcgcgaagatcatctcggcgaaa
tcctacgtcaacaccgacttcgactcgatcgaggaccgcatgctcggccagtatgacaac
ggcatcggcaggaagtgggcggacgccaactacatgaagttctacaacggcggggccgtc
ggcttcccctacctgtccgacggcatgtggttcctgacccagcacaagcgctggggactc
ttgaaggagcacccggactacctggcggtggcgaagaaggtcaaccgcatcgacatctac
aagcaggccgccgcgatgacgaagacgccactgccgaagtccgacatgcgtgcaagcaag
ctgatcgacggcgtggtgtgggacggcaggaaccccaaggcctacgcggacagcttccgg
atcaaggcctaa
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