Thiobacillus sedimenti: VA613_12575
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Entry
VA613_12575 CDS
T10461
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
tsw Thiobacillus sedimenti
Brite
KEGG Orthology (KO) [BR:
tsw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tsw01011
]
VA613_12575
Enzymes [BR:
tsw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
VA613_12575
Peptidoglycan biosynthesis and degradation proteins [BR:
tsw01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
VA613_12575
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
TPR_19
Cucumo_coat
Motif
Other DBs
NCBI-ProteinID:
WRS38826
LinkDB
All DBs
Position
complement(2517155..2519113)
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AA seq
652 aa
AA seq
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MLRSVLLFLLAVMSVTAVWAAPGDDAVQRAQEAYAARKPTELSRAARDVPPDHVLAPYVE
YWQLMLSGRTDDARIADFLARYPGSRLAEAVRADWLKSLGARQAWPAYLGEYVRLVKPDT
MLRCYAYRAEWALGNRSHEKEAIALWYTGRDMPSACSPLFQQLMEAGLLGEADIWRRIRL
ALEAGNPGVAKSVASALPEAQRLSPVRLDQATRDPARLLNGASLDLGQRGDREIALYALD
QLARRDSAAAERALRKFASQLNADDLRTAWARLATWAARRHEAGALTWFRQAGDVAVSDF
QREWWVRAALLAGDWKTVQRAIESMGDATRQQPAWRYWLARALLENGRRAAANALLLPLS
REHHYYGQLAQEELGPVMQAPAINIKAGGDDIAAVARQAGIVRAMALHELGLRYDATLEW
DWATREFSDIQLLAAAELARRAGWYDCAIKTAERTRELHDFELRFLAPYRAEAQKAAREN
GIDEAWVFGLMRQESRFVNVARSSVGASGLMQIMPATARWIAQRLGIRRFHVDEMRDPAT
NIQFGAYYLKHVQSSLDGSPVLATAAYNAGPARAQRWRGTQPMEAAVYIEAIPFAETRDY
VKKVMSNAMYYAARFGQPSSLLTDRLGMIPARKIAVPATEPDTSLEVEQPDD
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgatccgttcttcttttcctgctggccgtgatgagtgtgacggccgtgtgggcg
gcgccgggcgatgacgccgtgcagcgcgcgcaggaggcctatgccgcccgcaagcccacc
gaactgtcacgggcggcacgcgacgttccccccgaccatgtcctggcgccctatgtcgaa
tactggcagctgatgctgtcgggccgcaccgacgatgcgcgcatcgccgacttcctggcg
cgctacccgggcagccgcctggccgaggccgtgcgcgccgactggctgaagtcgctcggc
gcgcgccaggcgtggccggcgtacctcggcgagtacgtgcgcctcgtcaagccggacacc
atgctgcgctgctatgcctatcgggcggaatgggcgctggggaatcgcagccacgagaag
gaggcaatcgcgttgtggtacacgggacgcgacatgccatccgcctgcagcccgctgttt
cagcagctgatggaggccggcctcctcggtgaggccgacatctggcgacgcatccggctg
gccctggaagccggcaacccgggcgtggccaagtccgttgcgagcgcactgccggaggcg
cagcggctatcccctgtgcggctggatcaggccacccgcgaccccgcgcgcctgctgaac
ggcgcaagcctcgacctcgggcagcggggcgatcgcgagatcgcgctctacgcgctcgac
cagttggcgcgtcgcgactccgcggcggccgagcgcgccctgcgcaagttcgcctcccag
ctcaatgcggacgatttgcgcaccgcctgggcgcggcttgcgacctgggccgcgcgccgc
cacgaggccggcgcgctgacctggttccggcaggcaggggacgtcgcggtgagcgacttc
cagcgtgaatggtgggtgcgcgccgccctgctggcgggggactggaaaacggtgcagcgc
gccatcgagagcatgggcgacgccacccgccagcagccggcctggcgctactggctggca
cgcgccctgctggaaaacggccggcgtgcggcggcgaatgcgctgctgctgccgctctcg
cgcgagcatcattactacgggcagctcgcgcaggaagagctggggccggtgatgcaggcg
ccggccatcaacatcaaggcggggggcgacgatatcgccgccgtcgcccggcaggcgggc
atcgtgcgtgcgatggcgctgcatgaactgggattgcgctacgacgccaccctcgagtgg
gactgggcgacgcgcgaattctcggatatccagctgctggcggctgccgaactcgcccgg
cgggcagggtggtacgactgcgcgatcaagacggcggagcggacgcgcgaactgcacgac
ttcgagttgcgcttcctggcgccgtatcgcgccgaggcgcagaaggccgcgcgcgaaaac
ggcatcgacgaggcctgggtcttcggcctgatgcggcaggagagccgcttcgtgaacgtg
gcacgctcaagcgtcggcgcctcgggcttgatgcagatcatgccggccaccgcacgctgg
atcgcccagcggctcggcatccggcgcttccatgtcgacgagatgcgggacccggccaca
aatatccagttcggcgcctactatctcaagcacgtgcagtcctcgctcgacggctcgccc
gtgctggcgaccgcagcctacaatgccggccccgcgcgagcccagcgctggcgcggcacg
cagcccatggaggccgccgtctacatcgaggccatcccgttcgccgagacgcgcgactac
gtgaagaaggtgatgagcaacgccatgtactatgctgcccgcttcggccagccgtcctcg
ctgctgaccgaccggctgggcatgattccggcgcgcaagatcgccgtaccggcgacggag
ccggatacctcgctggaagtcgaacagccggacgattag
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