Thiobacillus sedimenti: VA613_13830
Help
Entry
VA613_13830 CDS
T10461
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tsw Thiobacillus sedimenti
Pathway
tsw00061
Fatty acid biosynthesis
tsw00071
Fatty acid degradation
tsw01100
Metabolic pathways
tsw01212
Fatty acid metabolism
tsw02024
Quorum sensing
tsw04146
Peroxisome
Module
tsw_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tsw00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
VA613_13830
00071 Fatty acid degradation
VA613_13830
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
VA613_13830
09145 Cellular community - prokaryotes
02024 Quorum sensing
VA613_13830
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tsw01004
]
VA613_13830
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsw04147
]
VA613_13830
Enzymes [BR:
tsw01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
VA613_13830
Lipid biosynthesis proteins [BR:
tsw01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
VA613_13830
Exosome [BR:
tsw04147
]
Exosomal proteins
Exosomal proteins of breast milk
VA613_13830
Exosomal proteins of breast cancer cells
VA613_13830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
WRS39072
LinkDB
All DBs
Position
complement(2782362..2784215)
Genome browser
AA seq
617 aa
AA seq
DB search
MTAATFRQPEEGGGRAAPFHPDTLGTLCGLFRARVAATPEQVAYRQFDEARDTWTSFTWG
QVAAEVARWQAALVKEGLVPGDRVAVMLKNSVEWVVFDQAALALGLVTVPLYLDDRPDSA
AYILDHSGAKLLLVEGRFQHKKLAQIAAAAKTLQHIVSLTAPENGLVNWSTRFVVAADWL
ADAAGTAIPDLHLTPDVLASIVYTSGTTGRPKGVMLTHENLLWNAFYASQCADFASHEVF
LSFLPMSHTLERTGGYYLPMLIGAEVVYARSIAQLAQDLQAIRPTVLISVPRIYERVYSR
IQDSLEKKGALARLLFGLAVRVGWRRFERSQGRAAWSSGLLLWPLLDRRVARSVTERLGG
RLRLAISGGAALSPEIARTFIGLGVPIIQGYGLTETSPVVCVNRPESNVPSSIGTPLPGV
EVKIGENDELLTRSRCVMRGYWRDDAATRTMIDGEGWLHSGDQASVDAWGHYHITGRLKD
IIVLNNGEKVPPVDMESAILLDPLFEQAMIVGEGRPYLAALVVLNAPHWQELAAGLNVAA
DDPATLRNPRVMKVLTHRVAHHLKHFPGYAQVRRLHAGLEPWTVDDGLLTPTLKIKRRQV
LDRHRAAVEAMYADFAR
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgacggcggcgacgttccggcaaccggaagaaggcggcgggcgtgccgcccccttccat
cccgacacgctcggcacgctgtgcggcctgttccgcgcgcgcgtcgccgccacgccggag
caggtcgcataccgccagttcgacgaagcccgtgatacctggacaagcttcacctgggga
caggtggccgccgaggttgcgcgctggcaggcggcgctggtcaaggagggcctggtgccg
ggcgaccgcgtggcggtgatgctgaagaacagcgtcgagtgggtcgtcttcgaccaggcc
gcgctggcgctcggcctcgtcaccgtgcccctctacctcgacgaccggcccgacagcgcg
gcctacatcctcgaccattcgggcgccaagctgctgctggtcgaggggcgcttccagcac
aagaagctggcgcagatcgccgcggcggcaaagaccctgcagcacatcgtcagcctgacc
gcgcccgagaacggcctcgtcaactggagcacacgcttcgtggtggcggccgactggctc
gccgacgcggccggaacggccattcccgacctccatctcacccccgacgtgctggcgagc
atcgtgtatacgtccggcacgacggggcgcccaaagggcgtgatgctgacgcacgagaac
ctgctgtggaacgccttctacgcctcccagtgcgcggatttcgcgtcgcacgaggtgttc
ctgtccttcctgccgatgtcgcacacgctggagcgcacgggaggctactacctgccgatg
ctgatcggcgccgaggtcgtctacgcacgctcgattgcccagctggcgcaggatctgcag
gcgatccgcccgaccgtcctgatctcggtgccgcgcatttacgaacgcgtctacagccgc
atccaggacagcctggagaagaagggggcactcgcccgactgctgttcgggctggcggtg
cgggtgggctggcggcgcttcgagcgcagccaggggcgggccgcctggtcgtcagggttg
ctgttgtggccgctgctcgacaggcgcgtggcgcgcagcgtcaccgaaagactgggcgga
cggctgcggctggcgatctcgggcggcgctgcgctctcgcccgagatcgcgcgcacgttc
attgggctcggcgtgccgatcatccagggctacggcctgactgagaccagccccgtcgtc
tgcgtcaaccggcccgagtccaacgttccttccagcatcggcacgccgctgccgggcgtg
gaggtgaagatcggcgagaacgacgagctcctcacgcgcagccgctgcgtgatgcggggc
tactggcgggacgacgcggccacccgcacgatgatcgacggcgagggctggctgcacagc
ggcgatcaggcgtcggtcgacgcctggggccactatcacatcaccgggcgcctcaaggac
atcatcgtcctgaacaacggcgagaaggtcccgccggtcgacatggaatccgcgatcctt
ctcgatccgctgttcgagcaggcgatgatcgtcggcgagggacgcccctacctggccgcg
ctggtcgtcctgaacgcgccccactggcaggaattggccgccggcctcaacgtcgcggcg
gacgatcccgccacgctgcgcaatccgcgcgtgatgaaggtactgacccaccgggtggcg
catcatctgaagcactttccgggctatgctcaggttcgccgcctgcacgccggactcgag
ccgtggacggtcgacgacggcctgctgacgccgaccctcaagatcaaacgcaggcaggtg
ctcgaccgccatcgcgcggcggtcgaggcgatgtacgccgatttcgcgcgctga
DBGET
integrated database retrieval system
