Thiobacillus sedimenti: VA613_13925
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Entry
VA613_13925 CDS
T10461
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
tsw Thiobacillus sedimenti
Brite
KEGG Orthology (KO) [BR:
tsw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsw03000
]
VA613_13925
Transcription factors [BR:
tsw03000
]
Prokaryotic type
Helix-turn-helix
LysR family
VA613_13925
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
HTH_5
HTH_30
Motif
Other DBs
NCBI-ProteinID:
WRS39090
UniProt:
A0ABZ1CI66
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All DBs
Position
2804372..2805310
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AA seq
312 aa
AA seq
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MRSHTTFRQLEIFEAIARLGSFTRASEELYLTQPTVSMQMKKLTEAVGVPLIEQVGKKLH
LTPDGQQLAQATREIFSILDRFTMSVAERRGLKQGQLSLMAITTASYFAPRLLGEFSKLY
PGIEVSLRVTNKEQVLASMADGLDDLYLVGQPPEHIDVVATPIMDNPIVVLAAPDHPLAH
RKKIPLDRIAAEPWLMREKGSGTRNAIERMFSGHGLNIHPRLELGSNEAIKQAILAGLGI
SALSRHALALNQPGQFAILDVEGFPILRHWYAVYPAGRQLSVVARAFLDYLLEHGEAAPL
SPSIKRSARTRI
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagccatacgacgtttcgccagctggaaattttcgaggccatcgcccggctcggc
agcttcacccgcgcctccgaggagctttacctcacgcagccgaccgtgtcgatgcagatg
aagaagctcaccgaagcggtcggcgtgccgctgatcgagcaggtcggcaagaagctccac
ctgacccccgacggccagcagctcgcccaggccacgcgcgaaatcttcagcatcctcgac
cgtttcaccatgtcggtcgccgaacgccggggcctgaaacagggccagctcagcctgatg
gcgatcaccaccgcgtcgtacttcgcgccgcgcctgctcggcgaattctccaagctctac
cccggcatcgaagtctcgctgcgcgtcaccaacaaggagcaggtcctcgcgagcatggcc
gacggcctcgacgatctctatctggtcggacagccgccggagcatatcgacgtcgtcgcc
acgcccatcatggacaaccccatcgtcgtgctggccgcgccggaccatccgctggcgcac
cgcaagaagatcccgctcgaccggatcgccgcggagccgtggctgatgcgggagaagggc
tcgggcacccgcaatgcgatcgagcgcatgttcagcggccacggcctcaacatccacccg
cgcctggaactcggcagcaacgaagcaatcaagcaggcgatcctcgccgggctgggcatc
tccgccctctcgcgccacgcgctcgcgctcaaccagccggggcagttcgcgatcctcgac
gtcgagggctttcccatcctgcgccactggtacgcggtctatcccgcggggcgccagttg
tccgtggtggcgcgcgcgtttctcgattatctgctcgagcacggggaagccgccccgctg
tcgccgtcgatcaagcgatcggcccgcacaaggatctga
DBGET
integrated database retrieval system
