Thalassobellus suaedae: RHP49_03590
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Entry
RHP49_03590 CDS
T10801
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
tsx Thalassobellus suaedae
Brite
KEGG Orthology (KO) [BR:
tsx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsx03032
]
RHP49_03590 (gyrB)
03400 DNA repair and recombination proteins [BR:
tsx03400
]
RHP49_03590 (gyrB)
Enzymes [BR:
tsx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RHP49_03590 (gyrB)
DNA replication proteins [BR:
tsx03032
]
Prokaryotic type
DNA Topoisomerases
RHP49_03590 (gyrB)
DNA repair and recombination proteins [BR:
tsx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RHP49_03590 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WNH13344
UniProt:
A0ABY9Y526
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All DBs
Position
complement(811915..813864)
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AA seq
649 aa
AA seq
DB search
MSEEKEVFNEHNYSADSIQALEGMEHVRMRPSMYIGDVGTRGLHHLVYEVVDNSIDEALA
GHCNNITVTINEDNSITTEDDGRGIPVDLHKKEGVSALEVVMTKIGAGGKFDKDSYKVSG
GLHGVGVSCVNALSESLKATVYRKGEIWEQEYERGKAIYPVKKVGETDKRGTTVTFKPDS
TIFTQTLEYSYDTLASRLRELAFLNKGITVHLVDKRSKKEDGEFEGETFHSDEGLKEFIK
YLDATREPLMKDVIAFEGEKNGVPVEVAMIYNTSYAENLHSYVNNINTHEGGTHLSGFRR
GLTHTLKKYADESGLLKNLKFDIAGDDFREGLTAIISVKVQEPQFEGQTKTKLGNREVSA
SVSQAVSEMLTDYLEEHPDDAKIIVQKVILAAQARHAAQKARDMVQRKTVMSIGGLPGKL
SDCSEQDPAKCEVFLVEGDSAGGTAKQGRDRAFQAILPLRGKILNVEKAMVHKVFENEEI
KNIFTALGVTIGTEEDSKALNLSKLRYHKVVIMCDADIDGSHIATLILTFFFRYMKELIE
NGHIYIATPPLYLVKRGAKKQYAWSDKERDAIVSEFGDGSKIQRYKGLGEMNAEQLWDTT
MNPEFRTMRLVQIDNGTEADRIFSMLMGDEVPPRREFIEKNAIYANIDA
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaaaaagaagtctttaacgagcataattattcggcagatagtattcaggca
ttagaaggtatggagcatgtacgtatgcgtccttctatgtatattggagatgtaggtaca
agaggtttacatcatttagtttatgaagttgtagataactcgattgatgaggctttagca
ggacattgtaataatattaccgttactattaatgaagataactcgattactacagaagat
gatggtcgtggtattccagtagatttgcacaaaaaagaaggtgtttctgcattggaggtt
gttatgactaaaattggtgcaggtggtaaatttgataaagattcttataaggtttctggt
gggcttcacggtgttggtgtaagttgtgtgaatgctttgtcagaaagtttaaaagcgact
gtatatagaaaaggagagatttgggaacaggaatacgaacgtggaaaagcaatctatcct
gttaaaaaagtaggagagactgataaaagaggtacaacggttacgttcaagccagactca
actatttttactcaaactttagagtatagttatgatacgcttgcaagtcgtttgcgagaa
ttagcatttttgaataaaggaatcactgttcatttagttgataaaagatctaaaaaagaa
gatggtgagtttgaaggagaaacatttcattcagatgaaggtcttaaggagtttatcaag
tatttagatgcgactcgtgagccattaatgaaagatgttattgctttcgaaggtgaaaaa
aatggtgtccctgttgaagtcgctatgatttataacacatcgtatgccgagaatttacat
tcgtatgtaaataatattaatacacatgaaggtggaacacatctttctggtttccgtcgt
ggtttaacacatacacttaaaaaatatgcagatgaatcgggcttattaaaaaacttaaag
tttgatattgctggtgatgattttcgtgaaggattaactgccattatttctgtaaaagta
caagagccacaatttgaaggacaaacaaaaactaaattaggaaatagggaagtttctgct
tcggtaagtcaagcggtttcagaaatgttaaccgattatttagaagagcatccggatgat
gctaaaattattgttcaaaaagtaatattagcagcacaagcacgtcatgcagcgcaaaaa
gcacgtgatatggtacagcgtaaaaccgttatgagtattggtggtttacctggtaaatta
agtgattgttctgagcaagaccctgcaaaatgcgaagtatttcttgtagagggagattcg
gcaggtggaacggctaagcaaggtagagatagagcatttcaagcgattttaccattaaga
ggtaagatattgaatgttgaaaaagcgatggttcacaaagtttttgaaaacgaagagatt
aaaaatatttttacagcattaggggttactattggaactgaggaagatagtaaggcgctt
aacctttcaaaattacgttaccataaagtagttattatgtgtgatgccgatattgatggt
agtcacattgcaactctaattttaacattcttctttaggtatatgaaggaacttatagag
aacggacatatttatattgcaacaccaccattatatttagtgaagcgtggtgcaaaaaaa
caatatgcttggtctgataaagaacgcgatgctattgtttcggaatttggagatggatct
aaaatacaacgttataaaggtcttggggaaatgaatgctgagcaactttgggatacaaca
atgaatcctgaatttagaaccatgcgtttagttcaaattgataatggtacagaagcagat
agaattttctctatgttaatgggagatgaagtacctccgcgtagagagtttattgagaaa
aatgctatttatgcgaatattgatgcgtaa
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